JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:38 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2idla1.name2015-04-17 18:00 0 Job name flag file
[ ]jp_nIZaw9m.align2015-04-17 19:38 103KPSIBLAST alignment in FASTA format
[TXT]jp_nIZaw9m.als2015-04-17 19:38 2.4KAlscript command file for PS/PDF output
[ ]jp_nIZaw9m.blast.gz2015-04-17 19:37 302KCompressed PSIBLAST output file
[TXT]jp_nIZaw9m.coils.csv2015-04-17 19:38 702 COILS output in CSV format
[ ]jp_nIZaw9m.coilseq.lupas_142015-04-17 19:38 4.7KCOILS output, window length 14
[ ]jp_nIZaw9m.coilseq.lupas_212015-04-17 19:38 4.7KCOILS output, window length 21
[ ]jp_nIZaw9m.coilseq.lupas_282015-04-17 19:38 4.7KCOILS output, window length 28
[ ]jp_nIZaw9m.concise2015-04-17 19:38 201KPrediction: coiled-coil, solvent, alignment
[ ]jp_nIZaw9m.concise.blc2015-04-17 19:38 103KBLC format prediction and alignment data
[ ]jp_nIZaw9m.concise.fasta2015-04-17 19:38 105KPrediction: coiled-coil, solvent, alignment
[ ]jp_nIZaw9m.concise.pdf2015-04-17 19:38 690KPDF prediction and alignment data
[ ]jp_nIZaw9m.concise.ps2015-04-17 19:38 12MPrediction: coiled-coil, solvent, alignment
[ ]jp_nIZaw9m.fasta2015-04-17 19:34 126 Input query sequence in FASTA format
[ ]jp_nIZaw9m.full_MSA.fasta2015-04-17 19:37 336KFull MSA before JPred filters in FASTA
[TXT]jp_nIZaw9m.full_MSA.fasta.noGaps.html2015-04-17 19:38 236KFull MSA before JPred filters in FASTA
[TXT]jp_nIZaw9m.full_MSA.fasta.withGaps.html2015-04-17 19:38 2.0MFull MSA before JPred filters in FASTA
[ ]jp_nIZaw9m.hmm2015-04-17 19:38 21KHHMer2 profile of the alignment
[TXT]jp_nIZaw9m.html2015-04-17 19:38 270KHTML prediction and alignment data
[ ]jp_nIZaw9m.input2015-04-17 18:00 119 Raw input data for analysis
[ ]jp_nIZaw9m.jalview2015-04-17 19:38 3.1KJalview annotation file for alignment
[ ]jp_nIZaw9m.jnet2015-04-17 19:38 4.2KJnet secondary structure output
[TXT]jp_nIZaw9m.profile2015-04-17 19:36 18KPSIBLAST profile from alignment
[ ]jp_nIZaw9m.pssm2015-04-17 19:38 24KPSIBLAST PSSM for Jnet
[TXT]jp_nIZaw9m.results.html2016-02-15 12:20 54KJPred results page
[TXT]jp_nIZaw9m.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_nIZaw9m.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_nIZaw9m.seq2015-04-17 18:00 126 Sequence data file
[TXT]jp_nIZaw9m.simple.html2015-04-17 19:38 1.3KBrief HTML: sequence and prediction only
[TXT]jp_nIZaw9m.svg.html2015-04-17 19:38 46KJalview SVG summary of results
[ ]jp_nIZaw9m.tar.gz2015-04-17 19:38 1.4MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.