JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:56 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2idob_.name2015-04-17 19:21 0 Job name flag file
[ ]jp_9nTPSYd.align2015-04-17 21:56 9.3KPSIBLAST alignment in FASTA format
[TXT]jp_9nTPSYd.als2015-04-17 21:56 1.6KAlscript command file for PS/PDF output
[ ]jp_9nTPSYd.blast.gz2015-04-17 21:56 27KCompressed PSIBLAST output file
[TXT]jp_9nTPSYd.coils.csv2015-04-17 21:56 480 COILS output in CSV format
[ ]jp_9nTPSYd.coilseq.lupas_142015-04-17 21:56 3.1KCOILS output, window length 14
[ ]jp_9nTPSYd.coilseq.lupas_212015-04-17 21:56 3.1KCOILS output, window length 21
[ ]jp_9nTPSYd.coilseq.lupas_282015-04-17 21:56 3.1KCOILS output, window length 28
[ ]jp_9nTPSYd.concise2015-04-17 21:56 20KPrediction: coiled-coil, solvent, alignment
[ ]jp_9nTPSYd.concise.blc2015-04-17 21:56 10KBLC format prediction and alignment data
[ ]jp_9nTPSYd.concise.fasta2015-04-17 21:56 10KPrediction: coiled-coil, solvent, alignment
[ ]jp_9nTPSYd.concise.pdf2015-04-17 21:56 60KPDF prediction and alignment data
[ ]jp_9nTPSYd.concise.ps2015-04-17 21:56 1.1MPrediction: coiled-coil, solvent, alignment
[ ]jp_9nTPSYd.fasta2015-04-17 21:51 89 Input query sequence in FASTA format
[ ]jp_9nTPSYd.full_MSA.fasta2015-04-17 21:56 23KFull MSA before JPred filters in FASTA
[TXT]jp_9nTPSYd.full_MSA.fasta.noGaps.html2015-04-17 21:56 42KFull MSA before JPred filters in FASTA
[TXT]jp_9nTPSYd.full_MSA.fasta.withGaps.html2015-04-17 21:56 91KFull MSA before JPred filters in FASTA
[ ]jp_9nTPSYd.hmm2015-04-17 21:56 14KHHMer2 profile of the alignment
[TXT]jp_9nTPSYd.html2015-04-17 21:56 38KHTML prediction and alignment data
[ ]jp_9nTPSYd.input2015-04-17 19:21 82 Raw input data for analysis
[ ]jp_9nTPSYd.jalview2015-04-17 21:56 2.3KJalview annotation file for alignment
[ ]jp_9nTPSYd.jnet2015-04-17 21:56 2.8KJnet secondary structure output
[TXT]jp_9nTPSYd.profile2015-04-17 21:56 12KPSIBLAST profile from alignment
[ ]jp_9nTPSYd.pssm2015-04-17 21:56 16KPSIBLAST PSSM for Jnet
[TXT]jp_9nTPSYd.results.html2016-02-15 12:20 39KJPred results page
[TXT]jp_9nTPSYd.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_9nTPSYd.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_9nTPSYd.seq2015-04-17 19:21 89 Sequence data file
[TXT]jp_9nTPSYd.simple.html2015-04-17 21:56 1.1KBrief HTML: sequence and prediction only
[TXT]jp_9nTPSYd.svg.html2015-04-17 21:56 31KJalview SVG summary of results
[ ]jp_9nTPSYd.tar.gz2015-04-17 21:56 133KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.