A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 20:01 | 4.7K | JPred server log file |
| README | 2016-02-15 12:20 | 2.1K | Results file descriptions |
| d2ii1a_.name | 2015-04-17 18:08 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_PulDLeP.align | 2015-04-17 20:00 | 326K | PSIBLAST alignment in FASTA format |
| jp_PulDLeP.als | 2015-04-17 20:00 | 4.9K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_PulDLeP.blast.gz | 2015-04-17 19:58 | 3.4M | Compressed PSIBLAST output file |
| jp_PulDLeP.coils.csv | 2015-04-17 20:00 | 1.8K | COILS output in CSV format |
| jp_PulDLeP.coilseq.lupas_14 | 2015-04-17 20:00 | 12K | COILS output, window length 14 |
| jp_PulDLeP.coilseq.lupas_21 | 2015-04-17 20:00 | 12K | COILS output, window length 21 |
| jp_PulDLeP.coilseq.lupas_28 | 2015-04-17 20:00 | 12K | COILS output, window length 28 |
| jp_PulDLeP.concise | 2015-04-17 20:00 | 644K | Prediction: coiled-coil, solvent, alignment |
| jp_PulDLeP.concise.blc | 2015-04-17 20:00 | 325K | BLC format prediction and alignment data |
| jp_PulDLeP.concise.fasta | 2015-04-17 20:00 | 329K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_PulDLeP.concise.pdf | 2015-04-17 20:00 | 2.3M | PDF prediction and alignment data |
| jp_PulDLeP.concise.ps | 2015-04-17 20:00 | 41M | Prediction: coiled-coil, solvent, alignment |
| jp_PulDLeP.fasta | 2015-04-17 19:49 | 314 | Input query sequence in FASTA format |
| jp_PulDLeP.full_MSA.fasta | 2015-04-17 19:58 | 7.0M | Full MSA before JPred filters in FASTA |
| jp_PulDLeP.full_MSA.fasta.noGaps.html | 2015-04-17 20:01 | 691K | Full MSA before JPred filters in FASTA |
| jp_PulDLeP.full_MSA.fasta.withGaps.html | 2015-04-17 20:01 | 16M | Full MSA before JPred filters in FASTA |
| jp_PulDLeP.hmm | 2015-04-17 20:00 | 56K | HHMer2 profile of the alignment |
| jp_PulDLeP.html | 2015-04-17 20:00 | 551K | HTML prediction and alignment data |
| jp_PulDLeP.input | 2015-04-17 18:08 | 304 | Raw input data for analysis |
| jp_PulDLeP.jalview | 2015-04-17 20:00 | 6.7K | Jalview annotation file for alignment |
| jp_PulDLeP.jnet | 2015-04-17 20:00 | 11K | Jnet secondary structure output |
| jp_PulDLeP.profile | 2015-04-17 19:55 | 47K | PSIBLAST profile from alignment |
| jp_PulDLeP.pssm | 2015-04-17 20:00 | 64K | PSIBLAST PSSM for Jnet |
| jp_PulDLeP.results.html | 2016-02-15 12:20 | 126K | JPred results page |
| jp_PulDLeP.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_PulDLeP.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_PulDLeP.seq | 2015-04-17 18:08 | 314 | Sequence data file |
| jp_PulDLeP.simple.html | 2015-04-17 20:00 | 2.0K | Brief HTML: sequence and prediction only |
![[TXT]](jp_PulDLeP.svg.html) | jp_PulDLeP.svg.html | 2015-04-17 20:01 | 118K | Jalview SVG summary of results |
| jp_PulDLeP.tar.gz | 2015-04-17 20:01 | 7.6M | Archive containing complete results |
