JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 15:54 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2in5a1.name2015-04-17 15:40 0 Job name flag file
[ ]jp_dwbeEyu.align2015-04-17 15:54 49KPSIBLAST alignment in FASTA format
[TXT]jp_dwbeEyu.als2015-04-17 15:54 3.4KAlscript command file for PS/PDF output
[ ]jp_dwbeEyu.blast.gz2015-04-17 15:54 155KCompressed PSIBLAST output file
[TXT]jp_dwbeEyu.coils.csv2015-04-17 15:54 1.2KCOILS output in CSV format
[ ]jp_dwbeEyu.coilseq.lupas_142015-04-17 15:54 8.2KCOILS output, window length 14
[ ]jp_dwbeEyu.coilseq.lupas_212015-04-17 15:54 8.2KCOILS output, window length 21
[ ]jp_dwbeEyu.coilseq.lupas_282015-04-17 15:54 8.2KCOILS output, window length 28
[ ]jp_dwbeEyu.concise2015-04-17 15:54 103KPrediction: coiled-coil, solvent, alignment
[ ]jp_dwbeEyu.concise.blc2015-04-17 15:54 51KBLC format prediction and alignment data
[ ]jp_dwbeEyu.concise.fasta2015-04-17 15:54 51KPrediction: coiled-coil, solvent, alignment
[ ]jp_dwbeEyu.concise.pdf2015-04-17 15:54 355KPDF prediction and alignment data
[ ]jp_dwbeEyu.concise.ps2015-04-17 15:54 6.2MPrediction: coiled-coil, solvent, alignment
[ ]jp_dwbeEyu.fasta2015-04-17 15:52 210 Input query sequence in FASTA format
[ ]jp_dwbeEyu.full_MSA.fasta2015-04-17 15:54 209KFull MSA before JPred filters in FASTA
[TXT]jp_dwbeEyu.full_MSA.fasta.noGaps.html2015-04-17 15:54 101KFull MSA before JPred filters in FASTA
[TXT]jp_dwbeEyu.full_MSA.fasta.withGaps.html2015-04-17 15:54 1.0MFull MSA before JPred filters in FASTA
[ ]jp_dwbeEyu.hmm2015-04-17 15:54 37KHHMer2 profile of the alignment
[TXT]jp_dwbeEyu.html2015-04-17 15:54 113KHTML prediction and alignment data
[ ]jp_dwbeEyu.input2015-04-17 15:40 202 Raw input data for analysis
[ ]jp_dwbeEyu.jalview2015-04-17 15:54 4.7KJalview annotation file for alignment
[ ]jp_dwbeEyu.jnet2015-04-17 15:54 7.2KJnet secondary structure output
[TXT]jp_dwbeEyu.profile2015-04-17 15:53 31KPSIBLAST profile from alignment
[ ]jp_dwbeEyu.pssm2015-04-17 15:54 42KPSIBLAST PSSM for Jnet
[TXT]jp_dwbeEyu.results.html2016-02-15 12:20 86KJPred results page
[TXT]jp_dwbeEyu.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_dwbeEyu.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_dwbeEyu.seq2015-04-17 15:40 210 Sequence data file
[TXT]jp_dwbeEyu.simple.html2015-04-17 15:54 1.6KBrief HTML: sequence and prediction only
[TXT]jp_dwbeEyu.svg.html2015-04-17 15:54 78KJalview SVG summary of results
[ ]jp_dwbeEyu.tar.gz2015-04-17 15:54 745KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.