JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]jp_27CqDJV.als2015-04-17 15:57 6.2KAlscript command file for PS/PDF output
[ ]jp_27CqDJV.tar.gz2015-04-17 15:58 2.6MArchive containing complete results
[ ]jp_27CqDJV.concise.blc2015-04-17 15:57 113KBLC format prediction and alignment data
[TXT]jp_27CqDJV.simple.html2015-04-17 15:57 2.6KBrief HTML: sequence and prediction only
[TXT]jp_27CqDJV.coils.csv2015-04-17 15:57 2.7KCOILS output in CSV format
[ ]jp_27CqDJV.coilseq.lupas_142015-04-17 15:57 19KCOILS output, window length 14
[ ]jp_27CqDJV.coilseq.lupas_212015-04-17 15:57 19KCOILS output, window length 21
[ ]jp_27CqDJV.coilseq.lupas_282015-04-17 15:57 19KCOILS output, window length 28
[ ]jp_27CqDJV.blast.gz2015-04-17 15:57 1.1MCompressed PSIBLAST output file
[ ]jp_27CqDJV.full_MSA.fasta2015-04-17 15:57 2.2MFull MSA before JPred filters in FASTA
[TXT]jp_27CqDJV.full_MSA.fasta.noGaps.html2015-04-17 15:58 1.0MFull MSA before JPred filters in FASTA
[TXT]jp_27CqDJV.full_MSA.fasta.withGaps.html2015-04-17 15:58 8.2MFull MSA before JPred filters in FASTA
[ ]jp_27CqDJV.hmm2015-04-17 15:57 86KHHMer2 profile of the alignment
[TXT]jp_27CqDJV.html2015-04-17 15:57 188KHTML prediction and alignment data
[TXT]jp_27CqDJV.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_27CqDJV.fasta2015-04-17 15:52 478 Input query sequence in FASTA format
[TXT]jp_27CqDJV.results.html2016-02-15 12:20 189KJPred results page
[TXT]LOG2015-04-17 15:58 4.7KJPred server log file
[TXT]jp_27CqDJV.svg.html2015-04-17 15:58 181KJalview SVG summary of results
[ ]jp_27CqDJV.jalview2015-04-17 15:57 9.8KJalview annotation file for alignment
[TXT]jp_27CqDJV.results_jalview.html2016-02-24 17:18 13KJalview results options
[ ]jp_27CqDJV.jnet2015-04-17 15:57 17KJnet secondary structure output
[TXT]d2iwka1.name2015-04-17 15:40 0 Job name flag file
[ ]jp_27CqDJV.concise.pdf2015-04-17 15:57 725KPDF prediction and alignment data
[ ]jp_27CqDJV.pssm2015-04-17 15:57 99KPSIBLAST PSSM for Jnet
[ ]jp_27CqDJV.align2015-04-17 15:57 108KPSIBLAST alignment in FASTA format
[TXT]jp_27CqDJV.profile2015-04-17 15:55 73KPSIBLAST profile from alignment
[ ]jp_27CqDJV.concise2015-04-17 15:57 230KPrediction: coiled-coil, solvent, alignment
[ ]jp_27CqDJV.concise.fasta2015-04-17 15:57 112KPrediction: coiled-coil, solvent, alignment
[ ]jp_27CqDJV.concise.ps2015-04-17 15:57 14MPrediction: coiled-coil, solvent, alignment
[ ]jp_27CqDJV.input2015-04-17 15:40 466 Raw input data for analysis
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[ ]jp_27CqDJV.seq2015-04-17 15:40 478 Sequence data file
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.