JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 15:54 4.9KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2j6ba1.name2015-04-17 15:41 0 Job name flag file
[ ]jp_ZGIu3mG.align2015-04-17 15:54 6.5KPSIBLAST alignment in FASTA format
[TXT]jp_ZGIu3mG.als2015-04-17 15:54 2.5KAlscript command file for PS/PDF output
[ ]jp_ZGIu3mG.blast.gz2015-04-17 15:54 15KCompressed PSIBLAST output file
[TXT]jp_ZGIu3mG.coils.csv2015-04-17 15:54 684 COILS output in CSV format
[ ]jp_ZGIu3mG.coilseq.lupas_142015-04-17 15:54 4.6KCOILS output, window length 14
[ ]jp_ZGIu3mG.coilseq.lupas_212015-04-17 15:54 4.6KCOILS output, window length 21
[ ]jp_ZGIu3mG.coilseq.lupas_282015-04-17 15:54 4.6KCOILS output, window length 28
[ ]jp_ZGIu3mG.concise2015-04-17 15:54 17KPrediction: coiled-coil, solvent, alignment
[ ]jp_ZGIu3mG.concise.blc2015-04-17 15:54 8.1KBLC format prediction and alignment data
[ ]jp_ZGIu3mG.concise.fasta2015-04-17 15:54 7.7KPrediction: coiled-coil, solvent, alignment
[ ]jp_ZGIu3mG.concise.pdf2015-04-17 15:54 2.2KPDF prediction and alignment data
[ ]jp_ZGIu3mG.concise.ps2015-04-17 15:54 1.3KPrediction: coiled-coil, solvent, alignment
[ ]jp_ZGIu3mG.fasta2015-04-17 15:52 123 Input query sequence in FASTA format
[ ]jp_ZGIu3mG.full_MSA.fasta2015-04-17 15:54 12KFull MSA before JPred filters in FASTA
[TXT]jp_ZGIu3mG.full_MSA.fasta.noGaps.html2015-04-17 15:54 14KFull MSA before JPred filters in FASTA
[TXT]jp_ZGIu3mG.full_MSA.fasta.withGaps.html2015-04-17 15:54 61KFull MSA before JPred filters in FASTA
[ ]jp_ZGIu3mG.hmm2015-04-17 15:54 20KHHMer2 profile of the alignment
[TXT]jp_ZGIu3mG.html2015-04-17 15:54 28KHTML prediction and alignment data
[ ]jp_ZGIu3mG.input2015-04-17 15:41 116 Raw input data for analysis
[ ]jp_ZGIu3mG.jalview2015-04-17 15:54 3.0KJalview annotation file for alignment
[ ]jp_ZGIu3mG.jnet2015-04-17 15:54 4.0KJnet secondary structure output
[TXT]jp_ZGIu3mG.profile2015-04-17 15:54 18KPSIBLAST profile from alignment
[ ]jp_ZGIu3mG.pssm2015-04-17 15:54 23KPSIBLAST PSSM for Jnet
[TXT]jp_ZGIu3mG.results.html2016-02-15 12:20 55KJPred results page
[TXT]jp_ZGIu3mG.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_ZGIu3mG.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_ZGIu3mG.seq2015-04-17 15:41 123 Sequence data file
[TXT]jp_ZGIu3mG.simple.html2015-04-17 15:54 1.3KBrief HTML: sequence and prediction only
[TXT]jp_ZGIu3mG.svg.html2015-04-17 15:54 47KJalview SVG summary of results
[ ]jp_ZGIu3mG.tar.gz2015-04-17 15:54 81KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.