JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:54 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2j9wa_.name2015-04-17 18:08 0 Job name flag file
[ ]jp_5E36OyV.align2015-04-17 19:54 19KPSIBLAST alignment in FASTA format
[TXT]jp_5E36OyV.als2015-04-17 19:54 1.9KAlscript command file for PS/PDF output
[ ]jp_5E36OyV.blast.gz2015-04-17 19:54 80KCompressed PSIBLAST output file
[TXT]jp_5E36OyV.coils.csv2015-04-17 19:54 636 COILS output in CSV format
[ ]jp_5E36OyV.coilseq.lupas_142015-04-17 19:54 4.2KCOILS output, window length 14
[ ]jp_5E36OyV.coilseq.lupas_212015-04-17 19:54 4.2KCOILS output, window length 21
[ ]jp_5E36OyV.coilseq.lupas_282015-04-17 19:54 4.2KCOILS output, window length 28
[ ]jp_5E36OyV.concise2015-04-17 19:54 40KPrediction: coiled-coil, solvent, alignment
[ ]jp_5E36OyV.concise.blc2015-04-17 19:54 20KBLC format prediction and alignment data
[ ]jp_5E36OyV.concise.fasta2015-04-17 19:54 20KPrediction: coiled-coil, solvent, alignment
[ ]jp_5E36OyV.concise.pdf2015-04-17 19:54 125KPDF prediction and alignment data
[ ]jp_5E36OyV.concise.ps2015-04-17 19:54 2.3MPrediction: coiled-coil, solvent, alignment
[ ]jp_5E36OyV.fasta2015-04-17 19:49 115 Input query sequence in FASTA format
[ ]jp_5E36OyV.full_MSA.fasta2015-04-17 19:54 84KFull MSA before JPred filters in FASTA
[TXT]jp_5E36OyV.full_MSA.fasta.noGaps.html2015-04-17 19:54 73KFull MSA before JPred filters in FASTA
[TXT]jp_5E36OyV.full_MSA.fasta.withGaps.html2015-04-17 19:54 296KFull MSA before JPred filters in FASTA
[ ]jp_5E36OyV.hmm2015-04-17 19:54 19KHHMer2 profile of the alignment
[TXT]jp_5E36OyV.html2015-04-17 19:54 60KHTML prediction and alignment data
[ ]jp_5E36OyV.input2015-04-17 18:08 108 Raw input data for analysis
[ ]jp_5E36OyV.jalview2015-04-17 19:54 2.9KJalview annotation file for alignment
[ ]jp_5E36OyV.jnet2015-04-17 19:54 3.8KJnet secondary structure output
[TXT]jp_5E36OyV.profile2015-04-17 19:53 16KPSIBLAST profile from alignment
[ ]jp_5E36OyV.pssm2015-04-17 19:54 22KPSIBLAST PSSM for Jnet
[TXT]jp_5E36OyV.results.html2016-02-15 12:20 50KJPred results page
[TXT]jp_5E36OyV.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_5E36OyV.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_5E36OyV.seq2015-04-17 18:08 115 Sequence data file
[TXT]jp_5E36OyV.simple.html2015-04-17 19:54 1.1KBrief HTML: sequence and prediction only
[TXT]jp_5E36OyV.svg.html2015-04-17 19:54 42KJalview SVG summary of results
[ ]jp_5E36OyV.tar.gz2015-04-17 19:54 296KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.