JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:19 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2jdia1.name2015-04-17 15:41 0 Job name flag file
[ ]jp__JfNTVw.align2015-04-17 16:18 142KPSIBLAST alignment in FASTA format
[TXT]jp__JfNTVw.als2015-04-17 16:18 2.2KAlscript command file for PS/PDF output
[ ]jp__JfNTVw.blast.gz2015-04-17 16:17 1.0MCompressed PSIBLAST output file
[TXT]jp__JfNTVw.coils.csv2015-04-17 16:18 816 COILS output in CSV format
[ ]jp__JfNTVw.coilseq.lupas_142015-04-17 16:18 5.5KCOILS output, window length 14
[ ]jp__JfNTVw.coilseq.lupas_212015-04-17 16:18 5.5KCOILS output, window length 21
[ ]jp__JfNTVw.coilseq.lupas_282015-04-17 16:18 5.5KCOILS output, window length 28
[ ]jp__JfNTVw.concise2015-04-17 16:18 276KPrediction: coiled-coil, solvent, alignment
[ ]jp__JfNTVw.concise.blc2015-04-17 16:18 142KBLC format prediction and alignment data
[ ]jp__JfNTVw.concise.fasta2015-04-17 16:18 143KPrediction: coiled-coil, solvent, alignment
[ ]jp__JfNTVw.concise.pdf2015-04-17 16:18 915KPDF prediction and alignment data
[ ]jp__JfNTVw.concise.ps2015-04-17 16:18 17MPrediction: coiled-coil, solvent, alignment
[ ]jp__JfNTVw.fasta2015-04-17 15:52 145 Input query sequence in FASTA format
[ ]jp__JfNTVw.full_MSA.fasta2015-04-17 16:17 1.2MFull MSA before JPred filters in FASTA
[TXT]jp__JfNTVw.full_MSA.fasta.noGaps.html2015-04-17 16:18 706KFull MSA before JPred filters in FASTA
[TXT]jp__JfNTVw.full_MSA.fasta.withGaps.html2015-04-17 16:18 5.5MFull MSA before JPred filters in FASTA
[ ]jp__JfNTVw.hmm2015-04-17 16:18 25KHHMer2 profile of the alignment
[TXT]jp__JfNTVw.html2015-04-17 16:18 342KHTML prediction and alignment data
[ ]jp__JfNTVw.input2015-04-17 15:41 138 Raw input data for analysis
[ ]jp__JfNTVw.jalview2015-04-17 16:18 3.5KJalview annotation file for alignment
[ ]jp__JfNTVw.jnet2015-04-17 16:18 4.8KJnet secondary structure output
[TXT]jp__JfNTVw.profile2015-04-17 16:03 21KPSIBLAST profile from alignment
[ ]jp__JfNTVw.pssm2015-04-17 16:18 28KPSIBLAST PSSM for Jnet
[TXT]jp__JfNTVw.results.html2016-02-15 12:20 62KJPred results page
[TXT]jp__JfNTVw.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp__JfNTVw.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp__JfNTVw.seq2015-04-17 15:41 145 Sequence data file
[TXT]jp__JfNTVw.simple.html2015-04-17 16:18 1.3KBrief HTML: sequence and prediction only
[TXT]jp__JfNTVw.svg.html2015-04-17 16:19 53KJalview SVG summary of results
[ ]jp__JfNTVw.tar.gz2015-04-17 16:19 2.8MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.