JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 22:46 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2jhfa2.name2015-04-17 19:22 0 Job name flag file
[ ]jp_eERkAqe.align2015-04-17 22:45 158KPSIBLAST alignment in FASTA format
[TXT]jp_eERkAqe.als2015-04-17 22:45 3.3KAlscript command file for PS/PDF output
[ ]jp_eERkAqe.blast.gz2015-04-17 22:41 9.6MCompressed PSIBLAST output file
[TXT]jp_eERkAqe.coils.csv2015-04-17 22:45 1.1KCOILS output in CSV format
[ ]jp_eERkAqe.coilseq.lupas_142015-04-17 22:45 7.4KCOILS output, window length 14
[ ]jp_eERkAqe.coilseq.lupas_212015-04-17 22:45 7.4KCOILS output, window length 21
[ ]jp_eERkAqe.coilseq.lupas_282015-04-17 22:45 7.4KCOILS output, window length 28
[ ]jp_eERkAqe.concise2015-04-17 22:45 311KPrediction: coiled-coil, solvent, alignment
[ ]jp_eERkAqe.concise.blc2015-04-17 22:45 158KBLC format prediction and alignment data
[ ]jp_eERkAqe.concise.fasta2015-04-17 22:45 160KPrediction: coiled-coil, solvent, alignment
[ ]jp_eERkAqe.concise.pdf2015-04-17 22:45 1.1MPDF prediction and alignment data
[ ]jp_eERkAqe.concise.ps2015-04-17 22:45 19MPrediction: coiled-coil, solvent, alignment
[ ]jp_eERkAqe.fasta2015-04-17 21:52 191 Input query sequence in FASTA format
[ ]jp_eERkAqe.full_MSA.fasta2015-04-17 22:44 23MFull MSA before JPred filters in FASTA
[TXT]jp_eERkAqe.full_MSA.fasta.noGaps.html2015-04-17 22:46 3.0MFull MSA before JPred filters in FASTA
[TXT]jp_eERkAqe.full_MSA.fasta.withGaps.html2015-04-17 22:46 64MFull MSA before JPred filters in FASTA
[ ]jp_eERkAqe.hmm2015-04-17 22:45 33KHHMer2 profile of the alignment
[TXT]jp_eERkAqe.html2015-04-17 22:45 334KHTML prediction and alignment data
[ ]jp_eERkAqe.input2015-04-17 19:22 183 Raw input data for analysis
[ ]jp_eERkAqe.jalview2015-04-17 22:45 4.4KJalview annotation file for alignment
[ ]jp_eERkAqe.jnet2015-04-17 22:45 6.5KJnet secondary structure output
[TXT]jp_eERkAqe.profile2015-04-17 22:26 28KPSIBLAST profile from alignment
[ ]jp_eERkAqe.pssm2015-04-17 22:45 38KPSIBLAST PSSM for Jnet
[TXT]jp_eERkAqe.results.html2016-02-15 12:20 82KJPred results page
[TXT]jp_eERkAqe.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_eERkAqe.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_eERkAqe.seq2015-04-17 19:22 191 Sequence data file
[TXT]jp_eERkAqe.simple.html2015-04-17 22:45 1.6KBrief HTML: sequence and prediction only
[TXT]jp_eERkAqe.svg.html2015-04-17 22:46 74KJalview SVG summary of results
[ ]jp_eERkAqe.tar.gz2015-04-17 22:46 18MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.