JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]d2jlia_.name2015-04-17 16:20 0 Job name flag file
[ ]jp_E8HepCj.input2015-04-17 16:20 107 Raw input data for analysis
[ ]jp_E8HepCj.fasta2015-04-17 16:48 114 Input query sequence in FASTA format
[ ]jp_E8HepCj.seq2015-04-17 16:20 114 Sequence data file
[TXT]jp_E8HepCj.coils.csv2015-04-17 16:53 630 COILS output in CSV format
[TXT]jp_E8HepCj.simple.html2015-04-17 16:53 1.3KBrief HTML: sequence and prediction only
[ ]jp_E8HepCj.concise.ps2015-04-17 16:53 1.3KPrediction: coiled-coil, solvent, alignment
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[ ]jp_E8HepCj.concise.pdf2015-04-17 16:53 2.2KPDF prediction and alignment data
[TXT]jp_E8HepCj.als2015-04-17 16:53 2.4KAlscript command file for PS/PDF output
[ ]jp_E8HepCj.jalview2015-04-17 16:53 2.9KJalview annotation file for alignment
[ ]jp_E8HepCj.jnet2015-04-17 16:53 3.7KJnet secondary structure output
[ ]jp_E8HepCj.coilseq.lupas_142015-04-17 16:53 4.2KCOILS output, window length 14
[ ]jp_E8HepCj.coilseq.lupas_212015-04-17 16:53 4.2KCOILS output, window length 21
[ ]jp_E8HepCj.coilseq.lupas_282015-04-17 16:53 4.2KCOILS output, window length 28
[TXT]LOG2015-04-17 16:53 4.9KJPred server log file
[TXT]jp_E8HepCj.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_E8HepCj.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[TXT]jp_E8HepCj.profile2015-04-17 16:51 16KPSIBLAST profile from alignment
[ ]jp_E8HepCj.hmm2015-04-17 16:53 19KHHMer2 profile of the alignment
[ ]jp_E8HepCj.pssm2015-04-17 16:53 21KPSIBLAST PSSM for Jnet
[TXT]jp_E8HepCj.svg.html2015-04-17 16:53 43KJalview SVG summary of results
[TXT]jp_E8HepCj.results.html2016-02-15 12:20 51KJPred results page
[ ]jp_E8HepCj.align2015-04-17 16:53 86KPSIBLAST alignment in FASTA format
[ ]jp_E8HepCj.concise.blc2015-04-17 16:53 86KBLC format prediction and alignment data
[ ]jp_E8HepCj.concise.fasta2015-04-17 16:53 87KPrediction: coiled-coil, solvent, alignment
[ ]jp_E8HepCj.concise2015-04-17 16:53 166KPrediction: coiled-coil, solvent, alignment
[TXT]jp_E8HepCj.html2015-04-17 16:53 237KHTML prediction and alignment data
[ ]jp_E8HepCj.blast.gz2015-04-17 16:52 715KCompressed PSIBLAST output file
[TXT]jp_E8HepCj.full_MSA.fasta.noGaps.html2015-04-17 16:53 747KFull MSA before JPred filters in FASTA
[ ]jp_E8HepCj.full_MSA.fasta2015-04-17 16:53 835KFull MSA before JPred filters in FASTA
[ ]jp_E8HepCj.tar.gz2015-04-17 16:53 1.4MArchive containing complete results
[TXT]jp_E8HepCj.full_MSA.fasta.withGaps.html2015-04-17 16:53 4.0MFull MSA before JPred filters in FASTA
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.