JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 15:59 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2nsza1.name2015-04-17 15:42 0 Job name flag file
[ ]jp__wBeO9I.align2015-04-17 15:58 106KPSIBLAST alignment in FASTA format
[TXT]jp__wBeO9I.als2015-04-17 15:58 2.4KAlscript command file for PS/PDF output
[ ]jp__wBeO9I.blast.gz2015-04-17 15:57 584KCompressed PSIBLAST output file
[TXT]jp__wBeO9I.coils.csv2015-04-17 15:58 804 COILS output in CSV format
[ ]jp__wBeO9I.coilseq.lupas_142015-04-17 15:58 5.4KCOILS output, window length 14
[ ]jp__wBeO9I.coilseq.lupas_212015-04-17 15:58 5.4KCOILS output, window length 21
[ ]jp__wBeO9I.coilseq.lupas_282015-04-17 15:58 5.4KCOILS output, window length 28
[ ]jp__wBeO9I.concise2015-04-17 15:58 209KPrediction: coiled-coil, solvent, alignment
[ ]jp__wBeO9I.concise.blc2015-04-17 15:58 107KBLC format prediction and alignment data
[ ]jp__wBeO9I.concise.fasta2015-04-17 15:58 108KPrediction: coiled-coil, solvent, alignment
[ ]jp__wBeO9I.concise.pdf2015-04-17 15:59 690KPDF prediction and alignment data
[ ]jp__wBeO9I.concise.ps2015-04-17 15:58 13MPrediction: coiled-coil, solvent, alignment
[ ]jp__wBeO9I.fasta2015-04-17 15:53 143 Input query sequence in FASTA format
[ ]jp__wBeO9I.full_MSA.fasta2015-04-17 15:57 1.2MFull MSA before JPred filters in FASTA
[TXT]jp__wBeO9I.full_MSA.fasta.noGaps.html2015-04-17 15:59 344KFull MSA before JPred filters in FASTA
[TXT]jp__wBeO9I.full_MSA.fasta.withGaps.html2015-04-17 15:59 4.3MFull MSA before JPred filters in FASTA
[ ]jp__wBeO9I.hmm2015-04-17 15:58 24KHHMer2 profile of the alignment
[TXT]jp__wBeO9I.html2015-04-17 15:58 263KHTML prediction and alignment data
[ ]jp__wBeO9I.input2015-04-17 15:42 136 Raw input data for analysis
[ ]jp__wBeO9I.jalview2015-04-17 15:58 3.5KJalview annotation file for alignment
[ ]jp__wBeO9I.jnet2015-04-17 15:58 4.8KJnet secondary structure output
[TXT]jp__wBeO9I.profile2015-04-17 15:56 21KPSIBLAST profile from alignment
[ ]jp__wBeO9I.pssm2015-04-17 15:58 28KPSIBLAST PSSM for Jnet
[TXT]jp__wBeO9I.results.html2016-02-15 12:20 62KJPred results page
[TXT]jp__wBeO9I.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp__wBeO9I.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp__wBeO9I.seq2015-04-17 15:42 143 Sequence data file
[TXT]jp__wBeO9I.simple.html2015-04-17 15:58 1.3KBrief HTML: sequence and prediction only
[TXT]jp__wBeO9I.svg.html2015-04-17 15:59 54KJalview SVG summary of results
[ ]jp__wBeO9I.tar.gz2015-04-17 15:59 1.7MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.