A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 20:54 | 4.7K | JPred server log file |
| README | 2016-02-15 12:20 | 2.1K | Results file descriptions |
| d2o5ha1.name | 2015-04-17 18:45 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_RcO7e7a.align | 2015-04-17 20:54 | 16K | PSIBLAST alignment in FASTA format |
| jp_RcO7e7a.als | 2015-04-17 20:54 | 2.2K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_RcO7e7a.blast.gz | 2015-04-17 20:54 | 37K | Compressed PSIBLAST output file |
| jp_RcO7e7a.coils.csv | 2015-04-17 20:54 | 780 | COILS output in CSV format |
| jp_RcO7e7a.coilseq.lupas_14 | 2015-04-17 20:54 | 5.2K | COILS output, window length 14 |
| jp_RcO7e7a.coilseq.lupas_21 | 2015-04-17 20:54 | 5.2K | COILS output, window length 21 |
| jp_RcO7e7a.coilseq.lupas_28 | 2015-04-17 20:54 | 5.2K | COILS output, window length 28 |
| jp_RcO7e7a.concise | 2015-04-17 20:54 | 35K | Prediction: coiled-coil, solvent, alignment |
| jp_RcO7e7a.concise.blc | 2015-04-17 20:54 | 17K | BLC format prediction and alignment data |
| jp_RcO7e7a.concise.fasta | 2015-04-17 20:54 | 17K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_RcO7e7a.concise.pdf | 2015-04-17 20:54 | 107K | PDF prediction and alignment data |
| jp_RcO7e7a.concise.ps | 2015-04-17 20:54 | 2.0M | Prediction: coiled-coil, solvent, alignment |
| jp_RcO7e7a.fasta | 2015-04-17 20:49 | 139 | Input query sequence in FASTA format |
| jp_RcO7e7a.full_MSA.fasta | 2015-04-17 20:54 | 58K | Full MSA before JPred filters in FASTA |
| jp_RcO7e7a.full_MSA.fasta.noGaps.html | 2015-04-17 20:54 | 35K | Full MSA before JPred filters in FASTA |
| jp_RcO7e7a.full_MSA.fasta.withGaps.html | 2015-04-17 20:54 | 258K | Full MSA before JPred filters in FASTA |
| jp_RcO7e7a.hmm | 2015-04-17 20:54 | 23K | HHMer2 profile of the alignment |
| jp_RcO7e7a.html | 2015-04-17 20:54 | 49K | HTML prediction and alignment data |
| jp_RcO7e7a.input | 2015-04-17 18:45 | 132 | Raw input data for analysis |
| jp_RcO7e7a.jalview | 2015-04-17 20:54 | 3.3K | Jalview annotation file for alignment |
| jp_RcO7e7a.jnet | 2015-04-17 20:54 | 4.6K | Jnet secondary structure output |
| jp_RcO7e7a.profile | 2015-04-17 20:53 | 20K | PSIBLAST profile from alignment |
| jp_RcO7e7a.pssm | 2015-04-17 20:54 | 27K | PSIBLAST PSSM for Jnet |
| jp_RcO7e7a.results.html | 2016-02-15 12:20 | 59K | JPred results page |
| jp_RcO7e7a.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_RcO7e7a.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_RcO7e7a.seq | 2015-04-17 18:45 | 139 | Sequence data file |
| jp_RcO7e7a.simple.html | 2015-04-17 20:54 | 1.2K | Brief HTML: sequence and prediction only |
![[TXT]](jp_RcO7e7a.svg.html) | jp_RcO7e7a.svg.html | 2015-04-17 20:54 | 51K | Jalview SVG summary of results |
| jp_RcO7e7a.tar.gz | 2015-04-17 20:54 | 222K | Archive containing complete results |
