JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:57 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2o6ka1.name2015-04-17 19:23 0 Job name flag file
[ ]jp_E8yKIf5.align2015-04-17 21:57 18KPSIBLAST alignment in FASTA format
[TXT]jp_E8yKIf5.als2015-04-17 21:57 1.8KAlscript command file for PS/PDF output
[ ]jp_E8yKIf5.blast.gz2015-04-17 21:57 50KCompressed PSIBLAST output file
[TXT]jp_E8yKIf5.coils.csv2015-04-17 21:57 450 COILS output in CSV format
[ ]jp_E8yKIf5.coilseq.lupas_142015-04-17 21:57 2.9KCOILS output, window length 14
[ ]jp_E8yKIf5.coilseq.lupas_212015-04-17 21:57 2.9KCOILS output, window length 21
[ ]jp_E8yKIf5.coilseq.lupas_282015-04-17 21:57 2.9KCOILS output, window length 28
[ ]jp_E8yKIf5.concise2015-04-17 21:57 36KPrediction: coiled-coil, solvent, alignment
[ ]jp_E8yKIf5.concise.blc2015-04-17 21:57 19KBLC format prediction and alignment data
[ ]jp_E8yKIf5.concise.fasta2015-04-17 21:57 18KPrediction: coiled-coil, solvent, alignment
[ ]jp_E8yKIf5.concise.pdf2015-04-17 21:57 103KPDF prediction and alignment data
[ ]jp_E8yKIf5.concise.ps2015-04-17 21:57 1.9MPrediction: coiled-coil, solvent, alignment
[ ]jp_E8yKIf5.fasta2015-04-17 21:54 83 Input query sequence in FASTA format
[ ]jp_E8yKIf5.full_MSA.fasta2015-04-17 21:57 39KFull MSA before JPred filters in FASTA
[TXT]jp_E8yKIf5.full_MSA.fasta.noGaps.html2015-04-17 21:57 62KFull MSA before JPred filters in FASTA
[TXT]jp_E8yKIf5.full_MSA.fasta.withGaps.html2015-04-17 21:57 179KFull MSA before JPred filters in FASTA
[ ]jp_E8yKIf5.hmm2015-04-17 21:57 13KHHMer2 profile of the alignment
[TXT]jp_E8yKIf5.html2015-04-17 21:57 65KHTML prediction and alignment data
[ ]jp_E8yKIf5.input2015-04-17 19:23 77 Raw input data for analysis
[ ]jp_E8yKIf5.jalview2015-04-17 21:57 2.2KJalview annotation file for alignment
[ ]jp_E8yKIf5.jnet2015-04-17 21:57 2.6KJnet secondary structure output
[TXT]jp_E8yKIf5.profile2015-04-17 21:56 12KPSIBLAST profile from alignment
[ ]jp_E8yKIf5.pssm2015-04-17 21:57 15KPSIBLAST PSSM for Jnet
[TXT]jp_E8yKIf5.results.html2016-02-15 12:20 39KJPred results page
[TXT]jp_E8yKIf5.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_E8yKIf5.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_E8yKIf5.seq2015-04-17 19:23 83 Sequence data file
[TXT]jp_E8yKIf5.simple.html2015-04-17 21:57 1.1KBrief HTML: sequence and prediction only
[TXT]jp_E8yKIf5.svg.html2015-04-17 21:57 31KJalview SVG summary of results
[ ]jp_E8yKIf5.tar.gz2015-04-17 21:57 229KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.