JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:05 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2o70a1.name2015-04-17 18:14 0 Job name flag file
[ ]jp_2wZ6M8D.align2015-04-17 20:05 191KPSIBLAST alignment in FASTA format
[TXT]jp_2wZ6M8D.als2015-04-17 20:05 2.7KAlscript command file for PS/PDF output
[ ]jp_2wZ6M8D.blast.gz2015-04-17 20:04 1.0MCompressed PSIBLAST output file
[TXT]jp_2wZ6M8D.coils.csv2015-04-17 20:05 1.0KCOILS output in CSV format
[ ]jp_2wZ6M8D.coilseq.lupas_142015-04-17 20:05 6.9KCOILS output, window length 14
[ ]jp_2wZ6M8D.coilseq.lupas_212015-04-17 20:05 6.9KCOILS output, window length 21
[ ]jp_2wZ6M8D.coilseq.lupas_282015-04-17 20:05 6.9KCOILS output, window length 28
[ ]jp_2wZ6M8D.concise2015-04-17 20:05 372KPrediction: coiled-coil, solvent, alignment
[ ]jp_2wZ6M8D.concise.blc2015-04-17 20:05 190KBLC format prediction and alignment data
[ ]jp_2wZ6M8D.concise.fasta2015-04-17 20:05 192KPrediction: coiled-coil, solvent, alignment
[ ]jp_2wZ6M8D.concise.pdf2015-04-17 20:05 1.2MPDF prediction and alignment data
[ ]jp_2wZ6M8D.concise.ps2015-04-17 20:05 23MPrediction: coiled-coil, solvent, alignment
[ ]jp_2wZ6M8D.fasta2015-04-17 19:59 180 Input query sequence in FASTA format
[ ]jp_2wZ6M8D.full_MSA.fasta2015-04-17 20:04 1.8MFull MSA before JPred filters in FASTA
[TXT]jp_2wZ6M8D.full_MSA.fasta.noGaps.html2015-04-17 20:05 448KFull MSA before JPred filters in FASTA
[TXT]jp_2wZ6M8D.full_MSA.fasta.withGaps.html2015-04-17 20:05 5.7MFull MSA before JPred filters in FASTA
[ ]jp_2wZ6M8D.hmm2015-04-17 20:05 31KHHMer2 profile of the alignment
[TXT]jp_2wZ6M8D.html2015-04-17 20:05 408KHTML prediction and alignment data
[ ]jp_2wZ6M8D.input2015-04-17 18:14 172 Raw input data for analysis
[ ]jp_2wZ6M8D.jalview2015-04-17 20:05 4.2KJalview annotation file for alignment
[ ]jp_2wZ6M8D.jnet2015-04-17 20:05 6.1KJnet secondary structure output
[TXT]jp_2wZ6M8D.profile2015-04-17 20:03 27KPSIBLAST profile from alignment
[ ]jp_2wZ6M8D.pssm2015-04-17 20:05 35KPSIBLAST PSSM for Jnet
[TXT]jp_2wZ6M8D.results.html2016-02-15 12:20 76KJPred results page
[TXT]jp_2wZ6M8D.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_2wZ6M8D.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_2wZ6M8D.seq2015-04-17 18:14 180 Sequence data file
[TXT]jp_2wZ6M8D.simple.html2015-04-17 20:05 1.4KBrief HTML: sequence and prediction only
[TXT]jp_2wZ6M8D.svg.html2015-04-17 20:05 68KJalview SVG summary of results
[ ]jp_2wZ6M8D.tar.gz2015-04-17 20:05 3.0MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.