A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 22:02 | 4.7K | JPred server log file |
| README | 2016-02-15 12:20 | 2.1K | Results file descriptions |
| d2oeba1.name | 2015-04-17 19:23 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_rqxRqBl.align | 2015-04-17 22:02 | 27K | PSIBLAST alignment in FASTA format |
| jp_rqxRqBl.als | 2015-04-17 22:02 | 2.1K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_rqxRqBl.blast.gz | 2015-04-17 22:02 | 59K | Compressed PSIBLAST output file |
| jp_rqxRqBl.coils.csv | 2015-04-17 22:02 | 942 | COILS output in CSV format |
| jp_rqxRqBl.coilseq.lupas_14 | 2015-04-17 22:02 | 6.4K | COILS output, window length 14 |
| jp_rqxRqBl.coilseq.lupas_21 | 2015-04-17 22:02 | 6.4K | COILS output, window length 21 |
| jp_rqxRqBl.coilseq.lupas_28 | 2015-04-17 22:02 | 6.4K | COILS output, window length 28 |
| jp_rqxRqBl.concise | 2015-04-17 22:02 | 59K | Prediction: coiled-coil, solvent, alignment |
| jp_rqxRqBl.concise.blc | 2015-04-17 22:02 | 29K | BLC format prediction and alignment data |
| jp_rqxRqBl.concise.fasta | 2015-04-17 22:02 | 29K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_rqxRqBl.concise.pdf | 2015-04-17 22:02 | 185K | PDF prediction and alignment data |
| jp_rqxRqBl.concise.ps | 2015-04-17 22:02 | 3.4M | Prediction: coiled-coil, solvent, alignment |
| jp_rqxRqBl.fasta | 2015-04-17 21:55 | 167 | Input query sequence in FASTA format |
| jp_rqxRqBl.full_MSA.fasta | 2015-04-17 22:02 | 72K | Full MSA before JPred filters in FASTA |
| jp_rqxRqBl.full_MSA.fasta.noGaps.html | 2015-04-17 22:02 | 51K | Full MSA before JPred filters in FASTA |
| jp_rqxRqBl.full_MSA.fasta.withGaps.html | 2015-04-17 22:02 | 284K | Full MSA before JPred filters in FASTA |
| jp_rqxRqBl.hmm | 2015-04-17 22:02 | 29K | HHMer2 profile of the alignment |
| jp_rqxRqBl.html | 2015-04-17 22:02 | 75K | HTML prediction and alignment data |
| jp_rqxRqBl.input | 2015-04-17 19:23 | 159 | Raw input data for analysis |
| jp_rqxRqBl.jalview | 2015-04-17 22:02 | 3.9K | Jalview annotation file for alignment |
| jp_rqxRqBl.jnet | 2015-04-17 22:02 | 5.6K | Jnet secondary structure output |
| jp_rqxRqBl.profile | 2015-04-17 22:00 | 25K | PSIBLAST profile from alignment |
| jp_rqxRqBl.pssm | 2015-04-17 22:02 | 33K | PSIBLAST PSSM for Jnet |
| jp_rqxRqBl.results.html | 2016-02-15 12:20 | 69K | JPred results page |
| jp_rqxRqBl.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_rqxRqBl.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_rqxRqBl.seq | 2015-04-17 19:23 | 167 | Sequence data file |
| jp_rqxRqBl.simple.html | 2015-04-17 22:02 | 1.3K | Brief HTML: sequence and prediction only |
![[TXT]](jp_rqxRqBl.svg.html) | jp_rqxRqBl.svg.html | 2015-04-17 22:02 | 60K | Jalview SVG summary of results |
| jp_rqxRqBl.tar.gz | 2015-04-17 22:02 | 376K | Archive containing complete results |
