JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:11 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2oeza1.name2015-04-17 18:16 0 Job name flag file
[ ]jp_NBYDCrK.align2015-04-17 20:10 76KPSIBLAST alignment in FASTA format
[TXT]jp_NBYDCrK.als2015-04-17 20:10 3.5KAlscript command file for PS/PDF output
[ ]jp_NBYDCrK.blast.gz2015-04-17 20:10 274KCompressed PSIBLAST output file
[TXT]jp_NBYDCrK.coils.csv2015-04-17 20:10 1.4KCOILS output in CSV format
[ ]jp_NBYDCrK.coilseq.lupas_142015-04-17 20:10 10KCOILS output, window length 14
[ ]jp_NBYDCrK.coilseq.lupas_212015-04-17 20:10 10KCOILS output, window length 21
[ ]jp_NBYDCrK.coilseq.lupas_282015-04-17 20:10 10KCOILS output, window length 28
[ ]jp_NBYDCrK.concise2015-04-17 20:10 158KPrediction: coiled-coil, solvent, alignment
[ ]jp_NBYDCrK.concise.blc2015-04-17 20:10 79KBLC format prediction and alignment data
[ ]jp_NBYDCrK.concise.fasta2015-04-17 20:10 79KPrediction: coiled-coil, solvent, alignment
[ ]jp_NBYDCrK.concise.pdf2015-04-17 20:11 588KPDF prediction and alignment data
[ ]jp_NBYDCrK.concise.ps2015-04-17 20:10 9.9MPrediction: coiled-coil, solvent, alignment
[ ]jp_NBYDCrK.fasta2015-04-17 20:03 257 Input query sequence in FASTA format
[ ]jp_NBYDCrK.full_MSA.fasta2015-04-17 20:10 231KFull MSA before JPred filters in FASTA
[TXT]jp_NBYDCrK.full_MSA.fasta.noGaps.html2015-04-17 20:11 164KFull MSA before JPred filters in FASTA
[TXT]jp_NBYDCrK.full_MSA.fasta.withGaps.html2015-04-17 20:11 1.2MFull MSA before JPred filters in FASTA
[ ]jp_NBYDCrK.hmm2015-04-17 20:10 45KHHMer2 profile of the alignment
[TXT]jp_NBYDCrK.html2015-04-17 20:10 159KHTML prediction and alignment data
[ ]jp_NBYDCrK.input2015-04-17 18:16 248 Raw input data for analysis
[ ]jp_NBYDCrK.jalview2015-04-17 20:10 5.7KJalview annotation file for alignment
[ ]jp_NBYDCrK.jnet2015-04-17 20:10 8.8KJnet secondary structure output
[TXT]jp_NBYDCrK.profile2015-04-17 20:07 39KPSIBLAST profile from alignment
[ ]jp_NBYDCrK.pssm2015-04-17 20:10 52KPSIBLAST PSSM for Jnet
[TXT]jp_NBYDCrK.results.html2016-02-15 12:20 105KJPred results page
[TXT]jp_NBYDCrK.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_NBYDCrK.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_NBYDCrK.seq2015-04-17 18:16 257 Sequence data file
[TXT]jp_NBYDCrK.simple.html2015-04-17 20:10 1.7KBrief HTML: sequence and prediction only
[TXT]jp_NBYDCrK.svg.html2015-04-17 20:11 97KJalview SVG summary of results
[ ]jp_NBYDCrK.tar.gz2015-04-17 20:11 1.2MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.