JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:50 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2okua1.name2015-04-17 17:33 0 Job name flag file
[ ]jp_8mh9ExB.align2015-04-17 18:50 13KPSIBLAST alignment in FASTA format
[TXT]jp_8mh9ExB.als2015-04-17 18:50 2.0KAlscript command file for PS/PDF output
[ ]jp_8mh9ExB.blast.gz2015-04-17 18:50 28KCompressed PSIBLAST output file
[TXT]jp_8mh9ExB.coils.csv2015-04-17 18:50 762 COILS output in CSV format
[ ]jp_8mh9ExB.coilseq.lupas_142015-04-17 18:50 5.1KCOILS output, window length 14
[ ]jp_8mh9ExB.coilseq.lupas_212015-04-17 18:50 5.1KCOILS output, window length 21
[ ]jp_8mh9ExB.coilseq.lupas_282015-04-17 18:50 5.1KCOILS output, window length 28
[ ]jp_8mh9ExB.concise2015-04-17 18:50 29KPrediction: coiled-coil, solvent, alignment
[ ]jp_8mh9ExB.concise.blc2015-04-17 18:50 14KBLC format prediction and alignment data
[ ]jp_8mh9ExB.concise.fasta2015-04-17 18:50 14KPrediction: coiled-coil, solvent, alignment
[ ]jp_8mh9ExB.concise.pdf2015-04-17 18:50 96KPDF prediction and alignment data
[ ]jp_8mh9ExB.concise.ps2015-04-17 18:50 1.7MPrediction: coiled-coil, solvent, alignment
[ ]jp_8mh9ExB.fasta2015-04-17 18:48 136 Input query sequence in FASTA format
[ ]jp_8mh9ExB.full_MSA.fasta2015-04-17 18:50 22KFull MSA before JPred filters in FASTA
[TXT]jp_8mh9ExB.full_MSA.fasta.noGaps.html2015-04-17 18:50 29KFull MSA before JPred filters in FASTA
[TXT]jp_8mh9ExB.full_MSA.fasta.withGaps.html2015-04-17 18:50 68KFull MSA before JPred filters in FASTA
[ ]jp_8mh9ExB.hmm2015-04-17 18:50 23KHHMer2 profile of the alignment
[TXT]jp_8mh9ExB.html2015-04-17 18:50 46KHTML prediction and alignment data
[ ]jp_8mh9ExB.input2015-04-17 17:33 129 Raw input data for analysis
[ ]jp_8mh9ExB.jalview2015-04-17 18:50 3.4KJalview annotation file for alignment
[ ]jp_8mh9ExB.jnet2015-04-17 18:50 4.5KJnet secondary structure output
[TXT]jp_8mh9ExB.profile2015-04-17 18:49 20KPSIBLAST profile from alignment
[ ]jp_8mh9ExB.pssm2015-04-17 18:50 26KPSIBLAST PSSM for Jnet
[TXT]jp_8mh9ExB.results.html2016-02-15 12:20 57KJPred results page
[TXT]jp_8mh9ExB.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_8mh9ExB.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_8mh9ExB.seq2015-04-17 17:33 136 Sequence data file
[TXT]jp_8mh9ExB.simple.html2015-04-17 18:50 1.2KBrief HTML: sequence and prediction only
[TXT]jp_8mh9ExB.svg.html2015-04-17 18:50 49KJalview SVG summary of results
[ ]jp_8mh9ExB.tar.gz2015-04-17 18:50 185KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.