JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:52 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2ou3a1.name2015-04-17 17:33 0 Job name flag file
[ ]jp_5y6Hy78.align2015-04-17 18:52 196KPSIBLAST alignment in FASTA format
[TXT]jp_5y6Hy78.als2015-04-17 18:52 2.4KAlscript command file for PS/PDF output
[ ]jp_5y6Hy78.blast.gz2015-04-17 18:51 805KCompressed PSIBLAST output file
[TXT]jp_5y6Hy78.coils.csv2015-04-17 18:52 1.0KCOILS output in CSV format
[ ]jp_5y6Hy78.coilseq.lupas_142015-04-17 18:52 6.7KCOILS output, window length 14
[ ]jp_5y6Hy78.coilseq.lupas_212015-04-17 18:52 6.7KCOILS output, window length 21
[ ]jp_5y6Hy78.coilseq.lupas_282015-04-17 18:52 6.7KCOILS output, window length 28
[ ]jp_5y6Hy78.concise2015-04-17 18:52 383KPrediction: coiled-coil, solvent, alignment
[ ]jp_5y6Hy78.concise.blc2015-04-17 18:52 196KBLC format prediction and alignment data
[ ]jp_5y6Hy78.concise.fasta2015-04-17 18:52 198KPrediction: coiled-coil, solvent, alignment
[ ]jp_5y6Hy78.concise.pdf2015-04-17 18:52 1.2MPDF prediction and alignment data
[ ]jp_5y6Hy78.concise.ps2015-04-17 18:52 23MPrediction: coiled-coil, solvent, alignment
[ ]jp_5y6Hy78.fasta2015-04-17 18:49 175 Input query sequence in FASTA format
[ ]jp_5y6Hy78.full_MSA.fasta2015-04-17 18:51 3.2MFull MSA before JPred filters in FASTA
[TXT]jp_5y6Hy78.full_MSA.fasta.noGaps.html2015-04-17 18:52 725KFull MSA before JPred filters in FASTA
[TXT]jp_5y6Hy78.full_MSA.fasta.withGaps.html2015-04-17 18:52 12MFull MSA before JPred filters in FASTA
[ ]jp_5y6Hy78.hmm2015-04-17 18:52 30KHHMer2 profile of the alignment
[TXT]jp_5y6Hy78.html2015-04-17 18:52 425KHTML prediction and alignment data
[ ]jp_5y6Hy78.input2015-04-17 17:33 167 Raw input data for analysis
[ ]jp_5y6Hy78.jalview2015-04-17 18:52 4.1KJalview annotation file for alignment
[ ]jp_5y6Hy78.jnet2015-04-17 18:52 5.9KJnet secondary structure output
[TXT]jp_5y6Hy78.profile2015-04-17 18:50 26KPSIBLAST profile from alignment
[ ]jp_5y6Hy78.pssm2015-04-17 18:52 34KPSIBLAST PSSM for Jnet
[TXT]jp_5y6Hy78.results.html2016-02-15 12:20 73KJPred results page
[TXT]jp_5y6Hy78.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_5y6Hy78.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_5y6Hy78.seq2015-04-17 17:33 175 Sequence data file
[TXT]jp_5y6Hy78.simple.html2015-04-17 18:52 1.3KBrief HTML: sequence and prediction only
[TXT]jp_5y6Hy78.svg.html2015-04-17 18:52 65KJalview SVG summary of results
[ ]jp_5y6Hy78.tar.gz2015-04-17 18:52 3.4MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.