A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 16:00 | 4.7K | JPred server log file |
| README | 2016-02-15 12:20 | 2.1K | Results file descriptions |
| d2ov0a_.name | 2015-04-17 15:43 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_pN3v8Ye.align | 2015-04-17 16:00 | 136K | PSIBLAST alignment in FASTA format |
| jp_pN3v8Ye.als | 2015-04-17 16:00 | 2.5K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_pN3v8Ye.blast.gz | 2015-04-17 15:59 | 2.2M | Compressed PSIBLAST output file |
| jp_pN3v8Ye.coils.csv | 2015-04-17 16:00 | 660 | COILS output in CSV format |
| jp_pN3v8Ye.coilseq.lupas_14 | 2015-04-17 16:00 | 4.4K | COILS output, window length 14 |
| jp_pN3v8Ye.coilseq.lupas_21 | 2015-04-17 16:00 | 4.4K | COILS output, window length 21 |
| jp_pN3v8Ye.coilseq.lupas_28 | 2015-04-17 16:00 | 4.4K | COILS output, window length 28 |
| jp_pN3v8Ye.concise | 2015-04-17 16:00 | 261K | Prediction: coiled-coil, solvent, alignment |
| jp_pN3v8Ye.concise.blc | 2015-04-17 16:00 | 135K | BLC format prediction and alignment data |
| jp_pN3v8Ye.concise.fasta | 2015-04-17 16:00 | 137K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_pN3v8Ye.concise.pdf | 2015-04-17 16:00 | 857K | PDF prediction and alignment data |
| jp_pN3v8Ye.concise.ps | 2015-04-17 16:00 | 15M | Prediction: coiled-coil, solvent, alignment |
| jp_pN3v8Ye.fasta | 2015-04-17 15:57 | 119 | Input query sequence in FASTA format |
| jp_pN3v8Ye.full_MSA.fasta | 2015-04-17 15:59 | 5.7M | Full MSA before JPred filters in FASTA |
| jp_pN3v8Ye.full_MSA.fasta.noGaps.html | 2015-04-17 16:00 | 916K | Full MSA before JPred filters in FASTA |
| jp_pN3v8Ye.full_MSA.fasta.withGaps.html | 2015-04-17 16:00 | 15M | Full MSA before JPred filters in FASTA |
| jp_pN3v8Ye.hmm | 2015-04-17 16:00 | 20K | HHMer2 profile of the alignment |
| jp_pN3v8Ye.html | 2015-04-17 16:00 | 357K | HTML prediction and alignment data |
| jp_pN3v8Ye.input | 2015-04-17 15:43 | 112 | Raw input data for analysis |
| jp_pN3v8Ye.jalview | 2015-04-17 16:00 | 2.9K | Jalview annotation file for alignment |
| jp_pN3v8Ye.jnet | 2015-04-17 16:00 | 3.9K | Jnet secondary structure output |
| jp_pN3v8Ye.profile | 2015-04-17 15:58 | 17K | PSIBLAST profile from alignment |
| jp_pN3v8Ye.pssm | 2015-04-17 16:00 | 23K | PSIBLAST PSSM for Jnet |
| jp_pN3v8Ye.results.html | 2016-02-15 12:20 | 51K | JPred results page |
| jp_pN3v8Ye.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_pN3v8Ye.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_pN3v8Ye.seq | 2015-04-17 15:43 | 119 | Sequence data file |
| jp_pN3v8Ye.simple.html | 2015-04-17 16:00 | 1.3K | Brief HTML: sequence and prediction only |
![[TXT]](jp_pN3v8Ye.svg.html) | jp_pN3v8Ye.svg.html | 2015-04-17 16:00 | 43K | Jalview SVG summary of results |
| jp_pN3v8Ye.tar.gz | 2015-04-17 16:00 | 4.7M | Archive containing complete results |
