JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:33 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2p12a1.name2015-04-17 18:09 0 Job name flag file
[ ]jp_y6saPgl.align2015-04-17 20:32 62KPSIBLAST alignment in FASTA format
[TXT]jp_y6saPgl.als2015-04-17 20:32 3.1KAlscript command file for PS/PDF output
[ ]jp_y6saPgl.blast.gz2015-04-17 20:32 180KCompressed PSIBLAST output file
[TXT]jp_y6saPgl.coils.csv2015-04-17 20:32 1.0KCOILS output in CSV format
[ ]jp_y6saPgl.coilseq.lupas_142015-04-17 20:32 6.9KCOILS output, window length 14
[ ]jp_y6saPgl.coilseq.lupas_212015-04-17 20:32 6.9KCOILS output, window length 21
[ ]jp_y6saPgl.coilseq.lupas_282015-04-17 20:32 6.9KCOILS output, window length 28
[ ]jp_y6saPgl.concise2015-04-17 20:32 125KPrediction: coiled-coil, solvent, alignment
[ ]jp_y6saPgl.concise.blc2015-04-17 20:32 63KBLC format prediction and alignment data
[ ]jp_y6saPgl.concise.fasta2015-04-17 20:32 63KPrediction: coiled-coil, solvent, alignment
[ ]jp_y6saPgl.concise.pdf2015-04-17 20:32 377KPDF prediction and alignment data
[ ]jp_y6saPgl.concise.ps2015-04-17 20:32 7.2MPrediction: coiled-coil, solvent, alignment
[ ]jp_y6saPgl.fasta2015-04-17 19:51 180 Input query sequence in FASTA format
[ ]jp_y6saPgl.full_MSA.fasta2015-04-17 20:32 379KFull MSA before JPred filters in FASTA
[TXT]jp_y6saPgl.full_MSA.fasta.noGaps.html2015-04-17 20:32 200KFull MSA before JPred filters in FASTA
[TXT]jp_y6saPgl.full_MSA.fasta.withGaps.html2015-04-17 20:32 1.8MFull MSA before JPred filters in FASTA
[ ]jp_y6saPgl.hmm2015-04-17 20:32 31KHHMer2 profile of the alignment
[TXT]jp_y6saPgl.html2015-04-17 20:32 143KHTML prediction and alignment data
[ ]jp_y6saPgl.input2015-04-17 18:09 172 Raw input data for analysis
[ ]jp_y6saPgl.jalview2015-04-17 20:32 4.1KJalview annotation file for alignment
[ ]jp_y6saPgl.jnet2015-04-17 20:32 6.1KJnet secondary structure output
[TXT]jp_y6saPgl.profile2015-04-17 20:22 27KPSIBLAST profile from alignment
[ ]jp_y6saPgl.pssm2015-04-17 20:32 35KPSIBLAST PSSM for Jnet
[TXT]jp_y6saPgl.results.html2016-02-15 12:20 75KJPred results page
[TXT]jp_y6saPgl.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_y6saPgl.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_y6saPgl.seq2015-04-17 18:09 180 Sequence data file
[TXT]jp_y6saPgl.simple.html2015-04-17 20:32 1.5KBrief HTML: sequence and prediction only
[TXT]jp_y6saPgl.svg.html2015-04-17 20:33 67KJalview SVG summary of results
[ ]jp_y6saPgl.tar.gz2015-04-17 20:33 804KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.