A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 22:01 | 4.7K | JPred server log file |
| README | 2016-02-15 12:20 | 2.1K | Results file descriptions |
| d2p1ma2.name | 2015-04-17 19:23 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_wASOKTx.align | 2015-04-17 22:01 | 39K | PSIBLAST alignment in FASTA format |
| jp_wASOKTx.als | 2015-04-17 22:01 | 1.6K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_wASOKTx.blast.gz | 2015-04-17 22:01 | 212K | Compressed PSIBLAST output file |
| jp_wASOKTx.coils.csv | 2015-04-17 22:01 | 390 | COILS output in CSV format |
| jp_wASOKTx.coilseq.lupas_14 | 2015-04-17 22:01 | 2.5K | COILS output, window length 14 |
| jp_wASOKTx.coilseq.lupas_21 | 2015-04-17 22:01 | 2.5K | COILS output, window length 21 |
| jp_wASOKTx.coilseq.lupas_28 | 2015-04-17 22:01 | 2.5K | COILS output, window length 28 |
| jp_wASOKTx.concise | 2015-04-17 22:01 | 75K | Prediction: coiled-coil, solvent, alignment |
| jp_wASOKTx.concise.blc | 2015-04-17 22:01 | 39K | BLC format prediction and alignment data |
| jp_wASOKTx.concise.fasta | 2015-04-17 22:01 | 39K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_wASOKTx.concise.pdf | 2015-04-17 22:01 | 220K | PDF prediction and alignment data |
| jp_wASOKTx.concise.ps | 2015-04-17 22:01 | 4.0M | Prediction: coiled-coil, solvent, alignment |
| jp_wASOKTx.fasta | 2015-04-17 21:55 | 73 | Input query sequence in FASTA format |
| jp_wASOKTx.full_MSA.fasta | 2015-04-17 22:01 | 229K | Full MSA before JPred filters in FASTA |
| jp_wASOKTx.full_MSA.fasta.noGaps.html | 2015-04-17 22:01 | 213K | Full MSA before JPred filters in FASTA |
| jp_wASOKTx.full_MSA.fasta.withGaps.html | 2015-04-17 22:01 | 1.1M | Full MSA before JPred filters in FASTA |
| jp_wASOKTx.hmm | 2015-04-17 22:01 | 11K | HHMer2 profile of the alignment |
| jp_wASOKTx.html | 2015-04-17 22:01 | 143K | HTML prediction and alignment data |
| jp_wASOKTx.input | 2015-04-17 19:23 | 67 | Raw input data for analysis |
| jp_wASOKTx.jalview | 2015-04-17 22:01 | 2.0K | Jalview annotation file for alignment |
| jp_wASOKTx.jnet | 2015-04-17 22:01 | 2.3K | Jnet secondary structure output |
| jp_wASOKTx.profile | 2015-04-17 21:59 | 10K | PSIBLAST profile from alignment |
| jp_wASOKTx.pssm | 2015-04-17 22:01 | 13K | PSIBLAST PSSM for Jnet |
| jp_wASOKTx.results.html | 2016-02-15 12:20 | 34K | JPred results page |
| jp_wASOKTx.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_wASOKTx.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_wASOKTx.seq | 2015-04-17 19:23 | 73 | Sequence data file |
| jp_wASOKTx.simple.html | 2015-04-17 22:01 | 1.0K | Brief HTML: sequence and prediction only |
![[TXT]](jp_wASOKTx.svg.html) | jp_wASOKTx.svg.html | 2015-04-17 22:01 | 26K | Jalview SVG summary of results |
| jp_wASOKTx.tar.gz | 2015-04-17 22:01 | 601K | Archive containing complete results |
