JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:07 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2p3ya1.name2015-04-17 15:44 0 Job name flag file
[ ]jp_cFEfg85.align2015-04-17 16:06 409KPSIBLAST alignment in FASTA format
[TXT]jp_cFEfg85.als2015-04-17 16:06 5.1KAlscript command file for PS/PDF output
[ ]jp_cFEfg85.blast.gz2015-04-17 16:05 2.8MCompressed PSIBLAST output file
[TXT]jp_cFEfg85.coils.csv2015-04-17 16:06 2.7KCOILS output in CSV format
[ ]jp_cFEfg85.coilseq.lupas_142015-04-17 16:06 19KCOILS output, window length 14
[ ]jp_cFEfg85.coilseq.lupas_212015-04-17 16:06 19KCOILS output, window length 21
[ ]jp_cFEfg85.coilseq.lupas_282015-04-17 16:06 19KCOILS output, window length 28
[ ]jp_cFEfg85.concise2015-04-17 16:06 818KPrediction: coiled-coil, solvent, alignment
[ ]jp_cFEfg85.concise.blc2015-04-17 16:06 410KBLC format prediction and alignment data
[ ]jp_cFEfg85.concise.fasta2015-04-17 16:06 414KPrediction: coiled-coil, solvent, alignment
[ ]jp_cFEfg85.concise.pdf2015-04-17 16:07 2.9MPDF prediction and alignment data
[ ]jp_cFEfg85.concise.ps2015-04-17 16:06 52MPrediction: coiled-coil, solvent, alignment
[ ]jp_cFEfg85.fasta2015-04-17 15:57 480 Input query sequence in FASTA format
[ ]jp_cFEfg85.full_MSA.fasta2015-04-17 16:05 5.1MFull MSA before JPred filters in FASTA
[TXT]jp_cFEfg85.full_MSA.fasta.noGaps.html2015-04-17 16:07 958KFull MSA before JPred filters in FASTA
[TXT]jp_cFEfg85.full_MSA.fasta.withGaps.html2015-04-17 16:07 20MFull MSA before JPred filters in FASTA
[ ]jp_cFEfg85.hmm2015-04-17 16:06 86KHHMer2 profile of the alignment
[TXT]jp_cFEfg85.html2015-04-17 16:06 610KHTML prediction and alignment data
[ ]jp_cFEfg85.input2015-04-17 15:44 468 Raw input data for analysis
[ ]jp_cFEfg85.jalview2015-04-17 16:06 9.9KJalview annotation file for alignment
[ ]jp_cFEfg85.jnet2015-04-17 16:06 17KJnet secondary structure output
[TXT]jp_cFEfg85.profile2015-04-17 16:03 73KPSIBLAST profile from alignment
[ ]jp_cFEfg85.pssm2015-04-17 16:06 99KPSIBLAST PSSM for Jnet
[TXT]jp_cFEfg85.results.html2016-02-15 12:20 187KJPred results page
[TXT]jp_cFEfg85.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_cFEfg85.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_cFEfg85.seq2015-04-17 15:44 480 Sequence data file
[TXT]jp_cFEfg85.simple.html2015-04-17 16:06 2.4KBrief HTML: sequence and prediction only
[TXT]jp_cFEfg85.svg.html2015-04-17 16:07 178KJalview SVG summary of results
[ ]jp_cFEfg85.tar.gz2015-04-17 16:07 8.1MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.