JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:10 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2p74a_.name2015-04-17 16:56 0 Job name flag file
[ ]jp_UgOTKdy.align2015-04-17 18:08 278KPSIBLAST alignment in FASTA format
[TXT]jp_UgOTKdy.als2015-04-17 18:08 3.7KAlscript command file for PS/PDF output
[ ]jp_UgOTKdy.blast.gz2015-04-17 18:05 11MCompressed PSIBLAST output file
[TXT]jp_UgOTKdy.coils.csv2015-04-17 18:08 1.6KCOILS output in CSV format
[ ]jp_UgOTKdy.coilseq.lupas_142015-04-17 18:08 11KCOILS output, window length 14
[ ]jp_UgOTKdy.coilseq.lupas_212015-04-17 18:08 11KCOILS output, window length 21
[ ]jp_UgOTKdy.coilseq.lupas_282015-04-17 18:08 11KCOILS output, window length 28
[ ]jp_UgOTKdy.concise2015-04-17 18:08 550KPrediction: coiled-coil, solvent, alignment
[ ]jp_UgOTKdy.concise.blc2015-04-17 18:08 278KBLC format prediction and alignment data
[ ]jp_UgOTKdy.concise.fasta2015-04-17 18:08 281KPrediction: coiled-coil, solvent, alignment
[ ]jp_UgOTKdy.concise.pdf2015-04-17 18:09 1.9MPDF prediction and alignment data
[ ]jp_UgOTKdy.concise.ps2015-04-17 18:08 34MPrediction: coiled-coil, solvent, alignment
[ ]jp_UgOTKdy.fasta2015-04-17 17:54 279 Input query sequence in FASTA format
[ ]jp_UgOTKdy.full_MSA.fasta2015-04-17 18:07 36MFull MSA before JPred filters in FASTA
[TXT]jp_UgOTKdy.full_MSA.fasta.noGaps.html2015-04-17 18:10 3.4MFull MSA before JPred filters in FASTA
[TXT]jp_UgOTKdy.full_MSA.fasta.withGaps.html2015-04-17 18:10 90MFull MSA before JPred filters in FASTA
[ ]jp_UgOTKdy.hmm2015-04-17 18:08 49KHHMer2 profile of the alignment
[TXT]jp_UgOTKdy.html2015-04-17 18:08 494KHTML prediction and alignment data
[ ]jp_UgOTKdy.input2015-04-17 16:56 270 Raw input data for analysis
[ ]jp_UgOTKdy.jalview2015-04-17 18:08 6.1KJalview annotation file for alignment
[ ]jp_UgOTKdy.jnet2015-04-17 18:08 9.6KJnet secondary structure output
[TXT]jp_UgOTKdy.profile2015-04-17 18:00 42KPSIBLAST profile from alignment
[ ]jp_UgOTKdy.pssm2015-04-17 18:08 57KPSIBLAST PSSM for Jnet
[TXT]jp_UgOTKdy.results.html2016-02-15 12:20 113KJPred results page
[TXT]jp_UgOTKdy.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_UgOTKdy.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_UgOTKdy.seq2015-04-17 16:56 279 Sequence data file
[TXT]jp_UgOTKdy.simple.html2015-04-17 18:08 1.8KBrief HTML: sequence and prediction only
[TXT]jp_UgOTKdy.svg.html2015-04-17 18:10 105KJalview SVG summary of results
[ ]jp_UgOTKdy.tar.gz2015-04-17 18:11 22MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.