JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:33 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2phcb2.name2015-04-17 16:57 0 Job name flag file
[ ]jp_LnAf6R5.align2015-04-17 18:33 100KPSIBLAST alignment in FASTA format
[TXT]jp_LnAf6R5.als2015-04-17 18:33 2.0KAlscript command file for PS/PDF output
[ ]jp_LnAf6R5.blast.gz2015-04-17 18:32 635KCompressed PSIBLAST output file
[TXT]jp_LnAf6R5.coils.csv2015-04-17 18:33 534 COILS output in CSV format
[ ]jp_LnAf6R5.coilseq.lupas_142015-04-17 18:33 3.5KCOILS output, window length 14
[ ]jp_LnAf6R5.coilseq.lupas_212015-04-17 18:33 3.5KCOILS output, window length 21
[ ]jp_LnAf6R5.coilseq.lupas_282015-04-17 18:33 3.5KCOILS output, window length 28
[ ]jp_LnAf6R5.concise2015-04-17 18:33 189KPrediction: coiled-coil, solvent, alignment
[ ]jp_LnAf6R5.concise.blc2015-04-17 18:33 99KBLC format prediction and alignment data
[ ]jp_LnAf6R5.concise.fasta2015-04-17 18:33 101KPrediction: coiled-coil, solvent, alignment
[ ]jp_LnAf6R5.concise.pdf2015-04-17 18:33 657KPDF prediction and alignment data
[ ]jp_LnAf6R5.concise.ps2015-04-17 18:33 11MPrediction: coiled-coil, solvent, alignment
[ ]jp_LnAf6R5.fasta2015-04-17 17:54 98 Input query sequence in FASTA format
[ ]jp_LnAf6R5.full_MSA.fasta2015-04-17 18:32 1.3MFull MSA before JPred filters in FASTA
[TXT]jp_LnAf6R5.full_MSA.fasta.noGaps.html2015-04-17 18:33 498KFull MSA before JPred filters in FASTA
[TXT]jp_LnAf6R5.full_MSA.fasta.withGaps.html2015-04-17 18:33 5.2MFull MSA before JPred filters in FASTA
[ ]jp_LnAf6R5.hmm2015-04-17 18:33 16KHHMer2 profile of the alignment
[TXT]jp_LnAf6R5.html2015-04-17 18:33 295KHTML prediction and alignment data
[ ]jp_LnAf6R5.input2015-04-17 16:57 91 Raw input data for analysis
[ ]jp_LnAf6R5.jalview2015-04-17 18:33 2.5KJalview annotation file for alignment
[ ]jp_LnAf6R5.jnet2015-04-17 18:33 3.1KJnet secondary structure output
[TXT]jp_LnAf6R5.profile2015-04-17 18:21 14KPSIBLAST profile from alignment
[ ]jp_LnAf6R5.pssm2015-04-17 18:33 18KPSIBLAST PSSM for Jnet
[TXT]jp_LnAf6R5.results.html2016-02-15 12:20 43KJPred results page
[TXT]jp_LnAf6R5.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_LnAf6R5.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_LnAf6R5.seq2015-04-17 16:57 98 Sequence data file
[TXT]jp_LnAf6R5.simple.html2015-04-17 18:33 1.2KBrief HTML: sequence and prediction only
[TXT]jp_LnAf6R5.svg.html2015-04-17 18:33 35KJalview SVG summary of results
[ ]jp_LnAf6R5.tar.gz2015-04-17 18:33 2.0MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.