JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 22:34 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2phna_.name2015-04-17 19:24 0 Job name flag file
[ ]jp_30ejS_g.align2015-04-17 22:33 159KPSIBLAST alignment in FASTA format
[TXT]jp_30ejS_g.als2015-04-17 22:33 4.1KAlscript command file for PS/PDF output
[ ]jp_30ejS_g.blast.gz2015-04-17 22:33 788KCompressed PSIBLAST output file
[TXT]jp_30ejS_g.coils.csv2015-04-17 22:33 1.5KCOILS output in CSV format
[ ]jp_30ejS_g.coilseq.lupas_142015-04-17 22:33 10KCOILS output, window length 14
[ ]jp_30ejS_g.coilseq.lupas_212015-04-17 22:33 10KCOILS output, window length 21
[ ]jp_30ejS_g.coilseq.lupas_282015-04-17 22:33 10KCOILS output, window length 28
[ ]jp_30ejS_g.concise2015-04-17 22:33 318KPrediction: coiled-coil, solvent, alignment
[ ]jp_30ejS_g.concise.blc2015-04-17 22:33 160KBLC format prediction and alignment data
[ ]jp_30ejS_g.concise.fasta2015-04-17 22:33 161KPrediction: coiled-coil, solvent, alignment
[ ]jp_30ejS_g.concise.pdf2015-04-17 22:34 1.1MPDF prediction and alignment data
[ ]jp_30ejS_g.concise.ps2015-04-17 22:33 20MPrediction: coiled-coil, solvent, alignment
[ ]jp_30ejS_g.fasta2015-04-17 21:56 264 Input query sequence in FASTA format
[ ]jp_30ejS_g.full_MSA.fasta2015-04-17 22:33 1.6MFull MSA before JPred filters in FASTA
[TXT]jp_30ejS_g.full_MSA.fasta.noGaps.html2015-04-17 22:34 384KFull MSA before JPred filters in FASTA
[TXT]jp_30ejS_g.full_MSA.fasta.withGaps.html2015-04-17 22:34 5.6MFull MSA before JPred filters in FASTA
[ ]jp_30ejS_g.hmm2015-04-17 22:33 47KHHMer2 profile of the alignment
[TXT]jp_30ejS_g.html2015-04-17 22:33 296KHTML prediction and alignment data
[ ]jp_30ejS_g.input2015-04-17 19:24 255 Raw input data for analysis
[ ]jp_30ejS_g.jalview2015-04-17 22:33 5.8KJalview annotation file for alignment
[ ]jp_30ejS_g.jnet2015-04-17 22:33 9.1KJnet secondary structure output
[TXT]jp_30ejS_g.profile2015-04-17 22:26 40KPSIBLAST profile from alignment
[ ]jp_30ejS_g.pssm2015-04-17 22:33 53KPSIBLAST PSSM for Jnet
[TXT]jp_30ejS_g.results.html2016-02-15 12:20 109KJPred results page
[TXT]jp_30ejS_g.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_30ejS_g.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_30ejS_g.seq2015-04-17 19:24 264 Sequence data file
[TXT]jp_30ejS_g.simple.html2015-04-17 22:33 1.8KBrief HTML: sequence and prediction only
[TXT]jp_30ejS_g.svg.html2015-04-17 22:34 101KJalview SVG summary of results
[ ]jp_30ejS_g.tar.gz2015-04-17 22:34 2.6MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.