JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:57 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2psba1.name2015-04-17 17:33 0 Job name flag file
[ ]jp_mcHYXMb.align2015-04-17 18:57 171KPSIBLAST alignment in FASTA format
[TXT]jp_mcHYXMb.als2015-04-17 18:57 4.4KAlscript command file for PS/PDF output
[ ]jp_mcHYXMb.blast.gz2015-04-17 18:57 1.0MCompressed PSIBLAST output file
[TXT]jp_mcHYXMb.coils.csv2015-04-17 18:57 1.7KCOILS output in CSV format
[ ]jp_mcHYXMb.coilseq.lupas_142015-04-17 18:57 12KCOILS output, window length 14
[ ]jp_mcHYXMb.coilseq.lupas_212015-04-17 18:57 12KCOILS output, window length 21
[ ]jp_mcHYXMb.coilseq.lupas_282015-04-17 18:57 12KCOILS output, window length 28
[ ]jp_mcHYXMb.concise2015-04-17 18:57 343KPrediction: coiled-coil, solvent, alignment
[ ]jp_mcHYXMb.concise.blc2015-04-17 18:57 172KBLC format prediction and alignment data
[ ]jp_mcHYXMb.concise.fasta2015-04-17 18:57 174KPrediction: coiled-coil, solvent, alignment
[ ]jp_mcHYXMb.concise.pdf2015-04-17 18:57 1.2MPDF prediction and alignment data
[ ]jp_mcHYXMb.concise.ps2015-04-17 18:57 21MPrediction: coiled-coil, solvent, alignment
[ ]jp_mcHYXMb.fasta2015-04-17 18:50 307 Input query sequence in FASTA format
[ ]jp_mcHYXMb.full_MSA.fasta2015-04-17 18:57 1.4MFull MSA before JPred filters in FASTA
[TXT]jp_mcHYXMb.full_MSA.fasta.noGaps.html2015-04-17 18:57 291KFull MSA before JPred filters in FASTA
[TXT]jp_mcHYXMb.full_MSA.fasta.withGaps.html2015-04-17 18:57 4.9MFull MSA before JPred filters in FASTA
[ ]jp_mcHYXMb.hmm2015-04-17 18:57 54KHHMer2 profile of the alignment
[TXT]jp_mcHYXMb.html2015-04-17 18:57 301KHTML prediction and alignment data
[ ]jp_mcHYXMb.input2015-04-17 17:33 297 Raw input data for analysis
[ ]jp_mcHYXMb.jalview2015-04-17 18:57 6.6KJalview annotation file for alignment
[ ]jp_mcHYXMb.jnet2015-04-17 18:57 11KJnet secondary structure output
[TXT]jp_mcHYXMb.profile2015-04-17 18:54 46KPSIBLAST profile from alignment
[ ]jp_mcHYXMb.pssm2015-04-17 18:57 62KPSIBLAST PSSM for Jnet
[TXT]jp_mcHYXMb.results.html2016-02-15 12:20 123KJPred results page
[TXT]jp_mcHYXMb.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_mcHYXMb.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_mcHYXMb.seq2015-04-17 17:33 307 Sequence data file
[TXT]jp_mcHYXMb.simple.html2015-04-17 18:57 2.0KBrief HTML: sequence and prediction only
[TXT]jp_mcHYXMb.svg.html2015-04-17 18:57 115KJalview SVG summary of results
[ ]jp_mcHYXMb.tar.gz2015-04-17 18:57 3.0MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.