JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:54 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2pspa1.name2015-04-17 16:22 0 Job name flag file
[ ]jp_4CQLkaW.align2015-04-17 16:54 58KPSIBLAST alignment in FASTA format
[TXT]jp_4CQLkaW.als2015-04-17 16:54 1.3KAlscript command file for PS/PDF output
[ ]jp_4CQLkaW.blast.gz2015-04-17 16:53 163KCompressed PSIBLAST output file
[TXT]jp_4CQLkaW.coils.csv2015-04-17 16:54 348 COILS output in CSV format
[ ]jp_4CQLkaW.coilseq.lupas_142015-04-17 16:54 2.2KCOILS output, window length 14
[ ]jp_4CQLkaW.coilseq.lupas_212015-04-17 16:54 2.2KCOILS output, window length 21
[ ]jp_4CQLkaW.coilseq.lupas_282015-04-17 16:54 2.2KCOILS output, window length 28
[ ]jp_4CQLkaW.concise2015-04-17 16:54 107KPrediction: coiled-coil, solvent, alignment
[ ]jp_4CQLkaW.concise.blc2015-04-17 16:54 58KBLC format prediction and alignment data
[ ]jp_4CQLkaW.concise.fasta2015-04-17 16:54 58KPrediction: coiled-coil, solvent, alignment
[ ]jp_4CQLkaW.concise.pdf2015-04-17 16:54 261KPDF prediction and alignment data
[ ]jp_4CQLkaW.concise.ps2015-04-17 16:54 5.2MPrediction: coiled-coil, solvent, alignment
[ ]jp_4CQLkaW.fasta2015-04-17 16:51 66 Input query sequence in FASTA format
[ ]jp_4CQLkaW.full_MSA.fasta2015-04-17 16:53 418KFull MSA before JPred filters in FASTA
[TXT]jp_4CQLkaW.full_MSA.fasta.noGaps.html2015-04-17 16:54 246KFull MSA before JPred filters in FASTA
[TXT]jp_4CQLkaW.full_MSA.fasta.withGaps.html2015-04-17 16:54 1.8MFull MSA before JPred filters in FASTA
[ ]jp_4CQLkaW.hmm2015-04-17 16:54 9.9KHHMer2 profile of the alignment
[TXT]jp_4CQLkaW.html2015-04-17 16:54 215KHTML prediction and alignment data
[ ]jp_4CQLkaW.input2015-04-17 16:22 60 Raw input data for analysis
[ ]jp_4CQLkaW.jalview2015-04-17 16:54 1.8KJalview annotation file for alignment
[ ]jp_4CQLkaW.jnet2015-04-17 16:54 2.0KJnet secondary structure output
[TXT]jp_4CQLkaW.profile2015-04-17 16:52 8.9KPSIBLAST profile from alignment
[ ]jp_4CQLkaW.pssm2015-04-17 16:54 11KPSIBLAST PSSM for Jnet
[TXT]jp_4CQLkaW.results.html2016-02-15 12:20 30KJPred results page
[TXT]jp_4CQLkaW.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_4CQLkaW.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_4CQLkaW.seq2015-04-17 16:22 66 Sequence data file
[TXT]jp_4CQLkaW.simple.html2015-04-17 16:54 1.0KBrief HTML: sequence and prediction only
[TXT]jp_4CQLkaW.svg.html2015-04-17 16:54 22KJalview SVG summary of results
[ ]jp_4CQLkaW.tar.gz2015-04-17 16:54 644KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.