JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 22:40 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2pvba_.name2015-04-17 19:24 0 Job name flag file
[ ]jp_DwASsbJ.align2015-04-17 22:39 97KPSIBLAST alignment in FASTA format
[TXT]jp_DwASsbJ.als2015-04-17 22:39 2.3KAlscript command file for PS/PDF output
[ ]jp_DwASsbJ.blast.gz2015-04-17 22:36 10MCompressed PSIBLAST output file
[TXT]jp_DwASsbJ.coils.csv2015-04-17 22:39 672 COILS output in CSV format
[ ]jp_DwASsbJ.coilseq.lupas_142015-04-17 22:39 4.5KCOILS output, window length 14
[ ]jp_DwASsbJ.coilseq.lupas_212015-04-17 22:39 4.5KCOILS output, window length 21
[ ]jp_DwASsbJ.coilseq.lupas_282015-04-17 22:39 4.5KCOILS output, window length 28
[ ]jp_DwASsbJ.concise2015-04-17 22:39 187KPrediction: coiled-coil, solvent, alignment
[ ]jp_DwASsbJ.concise.blc2015-04-17 22:39 97KBLC format prediction and alignment data
[ ]jp_DwASsbJ.concise.fasta2015-04-17 22:39 98KPrediction: coiled-coil, solvent, alignment
[ ]jp_DwASsbJ.concise.pdf2015-04-17 22:39 578KPDF prediction and alignment data
[ ]jp_DwASsbJ.concise.ps2015-04-17 22:39 11MPrediction: coiled-coil, solvent, alignment
[ ]jp_DwASsbJ.fasta2015-04-17 21:56 121 Input query sequence in FASTA format
[ ]jp_DwASsbJ.full_MSA.fasta2015-04-17 22:38 30MFull MSA before JPred filters in FASTA
[TXT]jp_DwASsbJ.full_MSA.fasta.noGaps.html2015-04-17 22:40 3.3MFull MSA before JPred filters in FASTA
[TXT]jp_DwASsbJ.full_MSA.fasta.withGaps.html2015-04-17 22:40 66MFull MSA before JPred filters in FASTA
[ ]jp_DwASsbJ.hmm2015-04-17 22:39 20KHHMer2 profile of the alignment
[TXT]jp_DwASsbJ.html2015-04-17 22:39 257KHTML prediction and alignment data
[ ]jp_DwASsbJ.input2015-04-17 19:24 114 Raw input data for analysis
[ ]jp_DwASsbJ.jalview2015-04-17 22:39 3.0KJalview annotation file for alignment
[ ]jp_DwASsbJ.jnet2015-04-17 22:39 4.0KJnet secondary structure output
[TXT]jp_DwASsbJ.profile2015-04-17 22:31 17KPSIBLAST profile from alignment
[ ]jp_DwASsbJ.pssm2015-04-17 22:39 23KPSIBLAST PSSM for Jnet
[TXT]jp_DwASsbJ.results.html2016-02-15 12:20 54KJPred results page
[TXT]jp_DwASsbJ.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_DwASsbJ.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_DwASsbJ.seq2015-04-17 19:24 121 Sequence data file
[TXT]jp_DwASsbJ.simple.html2015-04-17 22:39 1.3KBrief HTML: sequence and prediction only
[TXT]jp_DwASsbJ.svg.html2015-04-17 22:40 45KJalview SVG summary of results
[ ]jp_DwASsbJ.tar.gz2015-04-17 22:40 17MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.