JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 22:03 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2q6ka1.name2015-04-17 19:24 0 Job name flag file
[ ]jp_XwecwDv.align2015-04-17 22:03 122KPSIBLAST alignment in FASTA format
[TXT]jp_XwecwDv.als2015-04-17 22:03 2.8KAlscript command file for PS/PDF output
[ ]jp_XwecwDv.blast.gz2015-04-17 22:02 583KCompressed PSIBLAST output file
[TXT]jp_XwecwDv.coils.csv2015-04-17 22:03 1.0KCOILS output in CSV format
[ ]jp_XwecwDv.coilseq.lupas_142015-04-17 22:03 6.8KCOILS output, window length 14
[ ]jp_XwecwDv.coilseq.lupas_212015-04-17 22:03 6.8KCOILS output, window length 21
[ ]jp_XwecwDv.coilseq.lupas_282015-04-17 22:03 6.8KCOILS output, window length 28
[ ]jp_XwecwDv.concise2015-04-17 22:03 241KPrediction: coiled-coil, solvent, alignment
[ ]jp_XwecwDv.concise.blc2015-04-17 22:03 123KBLC format prediction and alignment data
[ ]jp_XwecwDv.concise.fasta2015-04-17 22:03 124KPrediction: coiled-coil, solvent, alignment
[ ]jp_XwecwDv.concise.pdf2015-04-17 22:03 881KPDF prediction and alignment data
[ ]jp_XwecwDv.concise.ps2015-04-17 22:03 15MPrediction: coiled-coil, solvent, alignment
[ ]jp_XwecwDv.fasta2015-04-17 21:57 178 Input query sequence in FASTA format
[ ]jp_XwecwDv.full_MSA.fasta2015-04-17 22:02 894KFull MSA before JPred filters in FASTA
[TXT]jp_XwecwDv.full_MSA.fasta.noGaps.html2015-04-17 22:03 283KFull MSA before JPred filters in FASTA
[TXT]jp_XwecwDv.full_MSA.fasta.withGaps.html2015-04-17 22:03 3.0MFull MSA before JPred filters in FASTA
[ ]jp_XwecwDv.hmm2015-04-17 22:03 31KHHMer2 profile of the alignment
[TXT]jp_XwecwDv.html2015-04-17 22:03 269KHTML prediction and alignment data
[ ]jp_XwecwDv.input2015-04-17 19:24 170 Raw input data for analysis
[ ]jp_XwecwDv.jalview2015-04-17 22:03 4.0KJalview annotation file for alignment
[ ]jp_XwecwDv.jnet2015-04-17 22:03 6.0KJnet secondary structure output
[TXT]jp_XwecwDv.profile2015-04-17 22:00 26KPSIBLAST profile from alignment
[ ]jp_XwecwDv.pssm2015-04-17 22:03 35KPSIBLAST PSSM for Jnet
[TXT]jp_XwecwDv.results.html2016-02-15 12:20 74KJPred results page
[TXT]jp_XwecwDv.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_XwecwDv.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_XwecwDv.seq2015-04-17 19:24 178 Sequence data file
[TXT]jp_XwecwDv.simple.html2015-04-17 22:03 1.4KBrief HTML: sequence and prediction only
[TXT]jp_XwecwDv.svg.html2015-04-17 22:03 66KJalview SVG summary of results
[ ]jp_XwecwDv.tar.gz2015-04-17 22:03 1.9MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.