JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:03 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2qhfa_.name2015-04-17 16:58 0 Job name flag file
[ ]jp_ZEKlPnC.align2015-04-17 18:03 265KPSIBLAST alignment in FASTA format
[TXT]jp_ZEKlPnC.als2015-04-17 18:03 4.9KAlscript command file for PS/PDF output
[ ]jp_ZEKlPnC.blast.gz2015-04-17 18:02 4.5MCompressed PSIBLAST output file
[TXT]jp_ZEKlPnC.coils.csv2015-04-17 18:03 2.3KCOILS output in CSV format
[ ]jp_ZEKlPnC.coilseq.lupas_142015-04-17 18:03 16KCOILS output, window length 14
[ ]jp_ZEKlPnC.coilseq.lupas_212015-04-17 18:03 16KCOILS output, window length 21
[ ]jp_ZEKlPnC.coilseq.lupas_282015-04-17 18:03 16KCOILS output, window length 28
[ ]jp_ZEKlPnC.concise2015-04-17 18:03 534KPrediction: coiled-coil, solvent, alignment
[ ]jp_ZEKlPnC.concise.blc2015-04-17 18:03 267KBLC format prediction and alignment data
[ ]jp_ZEKlPnC.concise.fasta2015-04-17 18:03 269KPrediction: coiled-coil, solvent, alignment
[ ]jp_ZEKlPnC.concise.pdf2015-04-17 18:03 1.8MPDF prediction and alignment data
[ ]jp_ZEKlPnC.concise.ps2015-04-17 18:03 33MPrediction: coiled-coil, solvent, alignment
[ ]jp_ZEKlPnC.fasta2015-04-17 17:56 410 Input query sequence in FASTA format
[ ]jp_ZEKlPnC.full_MSA.fasta2015-04-17 18:02 7.7MFull MSA before JPred filters in FASTA
[TXT]jp_ZEKlPnC.full_MSA.fasta.noGaps.html2015-04-17 18:03 1.7MFull MSA before JPred filters in FASTA
[TXT]jp_ZEKlPnC.full_MSA.fasta.withGaps.html2015-04-17 18:03 22MFull MSA before JPred filters in FASTA
[ ]jp_ZEKlPnC.hmm2015-04-17 18:03 74KHHMer2 profile of the alignment
[TXT]jp_ZEKlPnC.html2015-04-17 18:03 424KHTML prediction and alignment data
[ ]jp_ZEKlPnC.input2015-04-17 16:58 399 Raw input data for analysis
[ ]jp_ZEKlPnC.jalview2015-04-17 18:03 8.6KJalview annotation file for alignment
[ ]jp_ZEKlPnC.jnet2015-04-17 18:03 14KJnet secondary structure output
[TXT]jp_ZEKlPnC.profile2015-04-17 18:01 63KPSIBLAST profile from alignment
[ ]jp_ZEKlPnC.pssm2015-04-17 18:03 84KPSIBLAST PSSM for Jnet
[TXT]jp_ZEKlPnC.results.html2016-02-15 12:20 163KJPred results page
[TXT]jp_ZEKlPnC.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_ZEKlPnC.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_ZEKlPnC.seq2015-04-17 16:58 410 Sequence data file
[TXT]jp_ZEKlPnC.simple.html2015-04-17 18:03 2.3KBrief HTML: sequence and prediction only
[TXT]jp_ZEKlPnC.svg.html2015-04-17 18:03 155KJalview SVG summary of results
[ ]jp_ZEKlPnC.tar.gz2015-04-17 18:04 9.4MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.