JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[ ]jp_mtZgbdZ.tar.gz2015-04-17 23:21 4.7MArchive containing complete results
[TXT]jp_mtZgbdZ.svg.html2015-04-17 23:21 80KJalview SVG summary of results
[TXT]jp_mtZgbdZ.simple.html2015-04-17 23:20 1.6KBrief HTML: sequence and prediction only
[ ]jp_mtZgbdZ.seq2015-04-17 18:47 212 Sequence data file
[TXT]jp_mtZgbdZ.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[TXT]jp_mtZgbdZ.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_mtZgbdZ.results.html2016-02-15 12:20 88KJPred results page
[ ]jp_mtZgbdZ.pssm2015-04-17 23:20 42KPSIBLAST PSSM for Jnet
[TXT]jp_mtZgbdZ.profile2015-04-17 23:10 32KPSIBLAST profile from alignment
[ ]jp_mtZgbdZ.jnet2015-04-17 23:20 7.2KJnet secondary structure output
[ ]jp_mtZgbdZ.jalview2015-04-17 23:20 4.8KJalview annotation file for alignment
[ ]jp_mtZgbdZ.input2015-04-17 18:47 204 Raw input data for analysis
[TXT]jp_mtZgbdZ.html2015-04-17 23:20 257KHTML prediction and alignment data
[ ]jp_mtZgbdZ.hmm2015-04-17 23:20 37KHHMer2 profile of the alignment
[TXT]jp_mtZgbdZ.full_MSA.fasta.withGaps.html2015-04-17 23:21 16MFull MSA before JPred filters in FASTA
[TXT]jp_mtZgbdZ.full_MSA.fasta.noGaps.html2015-04-17 23:21 1.2MFull MSA before JPred filters in FASTA
[ ]jp_mtZgbdZ.full_MSA.fasta2015-04-17 23:20 3.8MFull MSA before JPred filters in FASTA
[ ]jp_mtZgbdZ.fasta2015-04-17 20:49 212 Input query sequence in FASTA format
[ ]jp_mtZgbdZ.concise.ps2015-04-17 23:20 15MPrediction: coiled-coil, solvent, alignment
[ ]jp_mtZgbdZ.concise.pdf2015-04-17 23:21 828KPDF prediction and alignment data
[ ]jp_mtZgbdZ.concise.fasta2015-04-17 23:20 126KPrediction: coiled-coil, solvent, alignment
[ ]jp_mtZgbdZ.concise.blc2015-04-17 23:20 125KBLC format prediction and alignment data
[ ]jp_mtZgbdZ.concise2015-04-17 23:20 248KPrediction: coiled-coil, solvent, alignment
[ ]jp_mtZgbdZ.coilseq.lupas_282015-04-17 23:20 8.3KCOILS output, window length 28
[ ]jp_mtZgbdZ.coilseq.lupas_212015-04-17 23:20 8.3KCOILS output, window length 21
[ ]jp_mtZgbdZ.coilseq.lupas_142015-04-17 23:20 8.3KCOILS output, window length 14
[TXT]jp_mtZgbdZ.coils.csv2015-04-17 23:20 1.2KCOILS output in CSV format
[ ]jp_mtZgbdZ.blast.gz2015-04-17 23:19 2.3MCompressed PSIBLAST output file
[TXT]jp_mtZgbdZ.als2015-04-17 23:20 3.2KAlscript command file for PS/PDF output
[ ]jp_mtZgbdZ.align2015-04-17 23:20 124KPSIBLAST alignment in FASTA format
[TXT]d2r7511.name2015-04-17 18:47 0 Job name flag file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]LOG2015-04-17 23:21 4.7KJPred server log file
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.