A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 20:11 | 4.7K | JPred server log file |
| README | 2016-02-15 12:20 | 2.1K | Results file descriptions |
| d2rbka_.name | 2015-04-17 18:10 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_eqThQD2.align | 2015-04-17 20:10 | 245K | PSIBLAST alignment in FASTA format |
| jp_eqThQD2.als | 2015-04-17 20:10 | 4.5K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_eqThQD2.blast.gz | 2015-04-17 20:07 | 20M | Compressed PSIBLAST output file |
| jp_eqThQD2.coils.csv | 2015-04-17 20:10 | 1.6K | COILS output in CSV format |
| jp_eqThQD2.coilseq.lupas_14 | 2015-04-17 20:10 | 11K | COILS output, window length 14 |
| jp_eqThQD2.coilseq.lupas_21 | 2015-04-17 20:10 | 11K | COILS output, window length 21 |
| jp_eqThQD2.coilseq.lupas_28 | 2015-04-17 20:10 | 11K | COILS output, window length 28 |
| jp_eqThQD2.concise | 2015-04-17 20:10 | 487K | Prediction: coiled-coil, solvent, alignment |
| jp_eqThQD2.concise.blc | 2015-04-17 20:10 | 246K | BLC format prediction and alignment data |
| jp_eqThQD2.concise.fasta | 2015-04-17 20:10 | 248K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_eqThQD2.concise.pdf | 2015-04-17 20:10 | 1.9M | PDF prediction and alignment data |
| jp_eqThQD2.concise.ps | 2015-04-17 20:10 | 32M | Prediction: coiled-coil, solvent, alignment |
| jp_eqThQD2.fasta | 2015-04-17 19:52 | 277 | Input query sequence in FASTA format |
| jp_eqThQD2.full_MSA.fasta | 2015-04-17 20:09 | 37M | Full MSA before JPred filters in FASTA |
| jp_eqThQD2.full_MSA.fasta.noGaps.html | 2015-04-17 20:11 | 3.4M | Full MSA before JPred filters in FASTA |
| jp_eqThQD2.full_MSA.fasta.withGaps.html | 2015-04-17 20:11 | 90M | Full MSA before JPred filters in FASTA |
| jp_eqThQD2.hmm | 2015-04-17 20:10 | 49K | HHMer2 profile of the alignment |
| jp_eqThQD2.html | 2015-04-17 20:10 | 436K | HTML prediction and alignment data |
| jp_eqThQD2.input | 2015-04-17 18:10 | 268 | Raw input data for analysis |
| jp_eqThQD2.jalview | 2015-04-17 20:10 | 6.0K | Jalview annotation file for alignment |
| jp_eqThQD2.jnet | 2015-04-17 20:10 | 9.5K | Jnet secondary structure output |
| jp_eqThQD2.profile | 2015-04-17 20:05 | 42K | PSIBLAST profile from alignment |
| jp_eqThQD2.pssm | 2015-04-17 20:10 | 56K | PSIBLAST PSSM for Jnet |
| jp_eqThQD2.results.html | 2016-02-15 12:20 | 116K | JPred results page |
| jp_eqThQD2.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_eqThQD2.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_eqThQD2.seq | 2015-04-17 18:10 | 277 | Sequence data file |
| jp_eqThQD2.simple.html | 2015-04-17 20:10 | 1.9K | Brief HTML: sequence and prediction only |
![[TXT]](jp_eqThQD2.svg.html) | jp_eqThQD2.svg.html | 2015-04-17 20:11 | 108K | Jalview SVG summary of results |
| jp_eqThQD2.tar.gz | 2015-04-17 20:11 | 33M | Archive containing complete results |
