A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 20:02 | 4.7K | JPred server log file |
| README | 2016-02-15 12:20 | 2.1K | Results file descriptions |
| d2rlda1.name | 2015-04-17 18:10 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_LWHgrgY.align | 2015-04-17 20:02 | 126K | PSIBLAST alignment in FASTA format |
| jp_LWHgrgY.als | 2015-04-17 20:02 | 2.0K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_LWHgrgY.blast.gz | 2015-04-17 20:02 | 621K | Compressed PSIBLAST output file |
| jp_LWHgrgY.coils.csv | 2015-04-17 20:02 | 708 | COILS output in CSV format |
| jp_LWHgrgY.coilseq.lupas_14 | 2015-04-17 20:02 | 4.7K | COILS output, window length 14 |
| jp_LWHgrgY.coilseq.lupas_21 | 2015-04-17 20:02 | 4.7K | COILS output, window length 21 |
| jp_LWHgrgY.coilseq.lupas_28 | 2015-04-17 20:02 | 4.7K | COILS output, window length 28 |
| jp_LWHgrgY.concise | 2015-04-17 20:02 | 244K | Prediction: coiled-coil, solvent, alignment |
| jp_LWHgrgY.concise.blc | 2015-04-17 20:02 | 126K | BLC format prediction and alignment data |
| jp_LWHgrgY.concise.fasta | 2015-04-17 20:02 | 127K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_LWHgrgY.concise.pdf | 2015-04-17 20:02 | 825K | PDF prediction and alignment data |
| jp_LWHgrgY.concise.ps | 2015-04-17 20:02 | 15M | Prediction: coiled-coil, solvent, alignment |
| jp_LWHgrgY.fasta | 2015-04-17 19:52 | 127 | Input query sequence in FASTA format |
| jp_LWHgrgY.full_MSA.fasta | 2015-04-17 20:02 | 800K | Full MSA before JPred filters in FASTA |
| jp_LWHgrgY.full_MSA.fasta.noGaps.html | 2015-04-17 20:02 | 528K | Full MSA before JPred filters in FASTA |
| jp_LWHgrgY.full_MSA.fasta.withGaps.html | 2015-04-17 20:02 | 4.9M | Full MSA before JPred filters in FASTA |
| jp_LWHgrgY.hmm | 2015-04-17 20:02 | 21K | HHMer2 profile of the alignment |
| jp_LWHgrgY.html | 2015-04-17 20:02 | 326K | HTML prediction and alignment data |
| jp_LWHgrgY.input | 2015-04-17 18:10 | 120 | Raw input data for analysis |
| jp_LWHgrgY.jalview | 2015-04-17 20:02 | 3.2K | Jalview annotation file for alignment |
| jp_LWHgrgY.jnet | 2015-04-17 20:02 | 4.2K | Jnet secondary structure output |
| jp_LWHgrgY.profile | 2015-04-17 19:58 | 18K | PSIBLAST profile from alignment |
| jp_LWHgrgY.pssm | 2015-04-17 20:02 | 24K | PSIBLAST PSSM for Jnet |
| jp_LWHgrgY.results.html | 2016-02-15 12:20 | 54K | JPred results page |
| jp_LWHgrgY.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_LWHgrgY.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_LWHgrgY.seq | 2015-04-17 18:10 | 127 | Sequence data file |
| jp_LWHgrgY.simple.html | 2015-04-17 20:02 | 1.2K | Brief HTML: sequence and prediction only |
![[TXT]](jp_LWHgrgY.svg.html) | jp_LWHgrgY.svg.html | 2015-04-17 20:02 | 46K | Jalview SVG summary of results |
| jp_LWHgrgY.tar.gz | 2015-04-17 20:02 | 2.2M | Archive containing complete results |
