JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:54 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2saka_.name2015-04-17 16:23 0 Job name flag file
[ ]jp_dP0Yg0_.align2015-04-17 16:54 1.9KPSIBLAST alignment in FASTA format
[TXT]jp_dP0Yg0_.als2015-04-17 16:54 2.6KAlscript command file for PS/PDF output
[ ]jp_dP0Yg0_.blast.gz2015-04-17 16:54 4.8KCompressed PSIBLAST output file
[TXT]jp_dP0Yg0_.coils.csv2015-04-17 16:54 756 COILS output in CSV format
[ ]jp_dP0Yg0_.coilseq.lupas_142015-04-17 16:54 5.1KCOILS output, window length 14
[ ]jp_dP0Yg0_.coilseq.lupas_212015-04-17 16:54 5.1KCOILS output, window length 21
[ ]jp_dP0Yg0_.coilseq.lupas_282015-04-17 16:54 5.1KCOILS output, window length 28
[ ]jp_dP0Yg0_.concise2015-04-17 16:54 8.9KPrediction: coiled-coil, solvent, alignment
[ ]jp_dP0Yg0_.concise.blc2015-04-17 16:54 3.8KBLC format prediction and alignment data
[ ]jp_dP0Yg0_.concise.fasta2015-04-17 16:54 3.2KPrediction: coiled-coil, solvent, alignment
[ ]jp_dP0Yg0_.concise.pdf2015-04-17 16:54 26KPDF prediction and alignment data
[ ]jp_dP0Yg0_.concise.ps2015-04-17 16:54 423KPrediction: coiled-coil, solvent, alignment
[ ]jp_dP0Yg0_.fasta2015-04-17 16:52 135 Input query sequence in FASTA format
[ ]jp_dP0Yg0_.full_MSA.fasta2015-04-17 16:54 3.6KFull MSA before JPred filters in FASTA
[TXT]jp_dP0Yg0_.full_MSA.fasta.noGaps.html2015-04-17 16:54 5.8KFull MSA before JPred filters in FASTA
[TXT]jp_dP0Yg0_.full_MSA.fasta.withGaps.html2015-04-17 16:54 11KFull MSA before JPred filters in FASTA
[ ]jp_dP0Yg0_.hmm2015-04-17 16:54 23KHHMer2 profile of the alignment
[TXT]jp_dP0Yg0_.html2015-04-17 16:54 16KHTML prediction and alignment data
[ ]jp_dP0Yg0_.input2015-04-17 16:23 128 Raw input data for analysis
[ ]jp_dP0Yg0_.jalview2015-04-17 16:54 3.2KJalview annotation file for alignment
[ ]jp_dP0Yg0_.jnet2015-04-17 16:54 4.5KJnet secondary structure output
[TXT]jp_dP0Yg0_.profile2015-04-17 16:53 20KPSIBLAST profile from alignment
[ ]jp_dP0Yg0_.pssm2015-04-17 16:54 26KPSIBLAST PSSM for Jnet
[TXT]jp_dP0Yg0_.results.html2016-02-15 12:20 58KJPred results page
[TXT]jp_dP0Yg0_.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_dP0Yg0_.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_dP0Yg0_.seq2015-04-17 16:23 135 Sequence data file
[TXT]jp_dP0Yg0_.simple.html2015-04-17 16:54 1.4KBrief HTML: sequence and prediction only
[TXT]jp_dP0Yg0_.svg.html2015-04-17 16:54 50KJalview SVG summary of results
[ ]jp_dP0Yg0_.tar.gz2015-04-17 16:54 67KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.