JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:55 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2sici_.name2015-04-17 18:47 0 Job name flag file
[ ]jp_KvYnRMe.align2015-04-17 20:55 39KPSIBLAST alignment in FASTA format
[TXT]jp_KvYnRMe.als2015-04-17 20:55 2.2KAlscript command file for PS/PDF output
[ ]jp_KvYnRMe.blast.gz2015-04-17 20:55 114KCompressed PSIBLAST output file
[TXT]jp_KvYnRMe.coils.csv2015-04-17 20:55 672 COILS output in CSV format
[ ]jp_KvYnRMe.coilseq.lupas_142015-04-17 20:55 4.5KCOILS output, window length 14
[ ]jp_KvYnRMe.coilseq.lupas_212015-04-17 20:55 4.5KCOILS output, window length 21
[ ]jp_KvYnRMe.coilseq.lupas_282015-04-17 20:55 4.5KCOILS output, window length 28
[ ]jp_KvYnRMe.concise2015-04-17 20:55 78KPrediction: coiled-coil, solvent, alignment
[ ]jp_KvYnRMe.concise.blc2015-04-17 20:55 40KBLC format prediction and alignment data
[ ]jp_KvYnRMe.concise.fasta2015-04-17 20:55 40KPrediction: coiled-coil, solvent, alignment
[ ]jp_KvYnRMe.concise.pdf2015-04-17 20:55 238KPDF prediction and alignment data
[ ]jp_KvYnRMe.concise.ps2015-04-17 20:55 4.3MPrediction: coiled-coil, solvent, alignment
[ ]jp_KvYnRMe.fasta2015-04-17 20:50 121 Input query sequence in FASTA format
[ ]jp_KvYnRMe.full_MSA.fasta2015-04-17 20:55 135KFull MSA before JPred filters in FASTA
[TXT]jp_KvYnRMe.full_MSA.fasta.noGaps.html2015-04-17 20:55 98KFull MSA before JPred filters in FASTA
[TXT]jp_KvYnRMe.full_MSA.fasta.withGaps.html2015-04-17 20:55 748KFull MSA before JPred filters in FASTA
[ ]jp_KvYnRMe.hmm2015-04-17 20:55 20KHHMer2 profile of the alignment
[TXT]jp_KvYnRMe.html2015-04-17 20:55 109KHTML prediction and alignment data
[ ]jp_KvYnRMe.input2015-04-17 18:47 114 Raw input data for analysis
[ ]jp_KvYnRMe.jalview2015-04-17 20:55 2.9KJalview annotation file for alignment
[ ]jp_KvYnRMe.jnet2015-04-17 20:55 4.0KJnet secondary structure output
[TXT]jp_KvYnRMe.profile2015-04-17 20:53 17KPSIBLAST profile from alignment
[ ]jp_KvYnRMe.pssm2015-04-17 20:55 23KPSIBLAST PSSM for Jnet
[TXT]jp_KvYnRMe.results.html2016-02-15 12:20 52KJPred results page
[TXT]jp_KvYnRMe.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_KvYnRMe.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_KvYnRMe.seq2015-04-17 18:47 121 Sequence data file
[TXT]jp_KvYnRMe.simple.html2015-04-17 20:55 1.2KBrief HTML: sequence and prediction only
[TXT]jp_KvYnRMe.svg.html2015-04-17 20:55 44KJalview SVG summary of results
[ ]jp_KvYnRMe.tar.gz2015-04-17 20:55 511KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.