A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 22:03 | 4.7K | JPred server log file |
| README | 2016-02-15 12:20 | 2.1K | Results file descriptions |
| d2vb1a_.name | 2015-04-17 19:25 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_NBZhPom.align | 2015-04-17 22:03 | 86K | PSIBLAST alignment in FASTA format |
| jp_NBZhPom.als | 2015-04-17 22:03 | 2.1K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_NBZhPom.blast.gz | 2015-04-17 22:03 | 437K | Compressed PSIBLAST output file |
| jp_NBZhPom.coils.csv | 2015-04-17 22:03 | 804 | COILS output in CSV format |
| jp_NBZhPom.coilseq.lupas_14 | 2015-04-17 22:03 | 5.4K | COILS output, window length 14 |
| jp_NBZhPom.coilseq.lupas_21 | 2015-04-17 22:03 | 5.4K | COILS output, window length 21 |
| jp_NBZhPom.coilseq.lupas_28 | 2015-04-17 22:03 | 5.4K | COILS output, window length 28 |
| jp_NBZhPom.concise | 2015-04-17 22:03 | 168K | Prediction: coiled-coil, solvent, alignment |
| jp_NBZhPom.concise.blc | 2015-04-17 22:03 | 86K | BLC format prediction and alignment data |
| jp_NBZhPom.concise.fasta | 2015-04-17 22:03 | 87K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_NBZhPom.concise.pdf | 2015-04-17 22:03 | 501K | PDF prediction and alignment data |
| jp_NBZhPom.concise.ps | 2015-04-17 22:03 | 9.6M | Prediction: coiled-coil, solvent, alignment |
| jp_NBZhPom.fasta | 2015-04-17 21:58 | 143 | Input query sequence in FASTA format |
| jp_NBZhPom.full_MSA.fasta | 2015-04-17 22:03 | 690K | Full MSA before JPred filters in FASTA |
| jp_NBZhPom.full_MSA.fasta.noGaps.html | 2015-04-17 22:03 | 296K | Full MSA before JPred filters in FASTA |
| jp_NBZhPom.full_MSA.fasta.withGaps.html | 2015-04-17 22:03 | 3.1M | Full MSA before JPred filters in FASTA |
| jp_NBZhPom.hmm | 2015-04-17 22:03 | 24K | HHMer2 profile of the alignment |
| jp_NBZhPom.html | 2015-04-17 22:03 | 208K | HTML prediction and alignment data |
| jp_NBZhPom.input | 2015-04-17 19:25 | 136 | Raw input data for analysis |
| jp_NBZhPom.jalview | 2015-04-17 22:03 | 3.3K | Jalview annotation file for alignment |
| jp_NBZhPom.jnet | 2015-04-17 22:03 | 4.8K | Jnet secondary structure output |
| jp_NBZhPom.profile | 2015-04-17 22:02 | 21K | PSIBLAST profile from alignment |
| jp_NBZhPom.pssm | 2015-04-17 22:03 | 28K | PSIBLAST PSSM for Jnet |
| jp_NBZhPom.results.html | 2016-02-15 12:20 | 60K | JPred results page |
| jp_NBZhPom.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_NBZhPom.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_NBZhPom.seq | 2015-04-17 19:25 | 143 | Sequence data file |
| jp_NBZhPom.simple.html | 2015-04-17 22:03 | 1.3K | Brief HTML: sequence and prediction only |
![[TXT]](jp_NBZhPom.svg.html) | jp_NBZhPom.svg.html | 2015-04-17 22:03 | 52K | Jalview SVG summary of results |
| jp_NBZhPom.tar.gz | 2015-04-17 22:03 | 1.3M | Archive containing complete results |
