JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:14 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2vdra_.name2015-04-17 15:45 0 Job name flag file
[ ]jp_JqnNCF9.align2015-04-17 16:12 182KPSIBLAST alignment in FASTA format
[TXT]jp_JqnNCF9.als2015-04-17 16:12 5.7KAlscript command file for PS/PDF output
[ ]jp_JqnNCF9.blast.gz2015-04-17 16:09 13MCompressed PSIBLAST output file
[TXT]jp_JqnNCF9.coils.csv2015-04-17 16:12 2.7KCOILS output in CSV format
[ ]jp_JqnNCF9.coilseq.lupas_142015-04-17 16:12 19KCOILS output, window length 14
[ ]jp_JqnNCF9.coilseq.lupas_212015-04-17 16:12 19KCOILS output, window length 21
[ ]jp_JqnNCF9.coilseq.lupas_282015-04-17 16:12 19KCOILS output, window length 28
[ ]jp_JqnNCF9.concise2015-04-17 16:12 373KPrediction: coiled-coil, solvent, alignment
[ ]jp_JqnNCF9.concise.blc2015-04-17 16:12 186KBLC format prediction and alignment data
[ ]jp_JqnNCF9.concise.fasta2015-04-17 16:12 186KPrediction: coiled-coil, solvent, alignment
[ ]jp_JqnNCF9.concise.pdf2015-04-17 16:13 1.1MPDF prediction and alignment data
[ ]jp_JqnNCF9.concise.ps2015-04-17 16:12 22MPrediction: coiled-coil, solvent, alignment
[ ]jp_JqnNCF9.fasta2015-04-17 15:59 471 Input query sequence in FASTA format
[ ]jp_JqnNCF9.full_MSA.fasta2015-04-17 16:11 38MFull MSA before JPred filters in FASTA
[TXT]jp_JqnNCF9.full_MSA.fasta.noGaps.html2015-04-17 16:14 2.9MFull MSA before JPred filters in FASTA
[TXT]jp_JqnNCF9.full_MSA.fasta.withGaps.html2015-04-17 16:14 93MFull MSA before JPred filters in FASTA
[ ]jp_JqnNCF9.hmm2015-04-17 16:12 85KHHMer2 profile of the alignment
[TXT]jp_JqnNCF9.html2015-04-17 16:12 289KHTML prediction and alignment data
[ ]jp_JqnNCF9.input2015-04-17 15:45 459 Raw input data for analysis
[ ]jp_JqnNCF9.jalview2015-04-17 16:12 9.6KJalview annotation file for alignment
[ ]jp_JqnNCF9.jnet2015-04-17 16:12 16KJnet secondary structure output
[TXT]jp_JqnNCF9.profile2015-04-17 16:06 72KPSIBLAST profile from alignment
[ ]jp_JqnNCF9.pssm2015-04-17 16:12 97KPSIBLAST PSSM for Jnet
[TXT]jp_JqnNCF9.results.html2016-02-15 12:20 183KJPred results page
[TXT]jp_JqnNCF9.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_JqnNCF9.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_JqnNCF9.seq2015-04-17 15:45 471 Sequence data file
[TXT]jp_JqnNCF9.simple.html2015-04-17 16:12 2.5KBrief HTML: sequence and prediction only
[TXT]jp_JqnNCF9.svg.html2015-04-17 16:14 175KJalview SVG summary of results
[ ]jp_JqnNCF9.tar.gz2015-04-17 16:14 22MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.