JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 22:05 4.9KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2vn6b_.name2015-04-17 19:25 0 Job name flag file
[ ]jp_OtBIfDc.align2015-04-17 22:04 102KPSIBLAST alignment in FASTA format
[TXT]jp_OtBIfDc.als2015-04-17 22:04 1.7KAlscript command file for PS/PDF output
[ ]jp_OtBIfDc.blast.gz2015-04-17 22:04 602KCompressed PSIBLAST output file
[TXT]jp_OtBIfDc.coils.csv2015-04-17 22:04 414 COILS output in CSV format
[ ]jp_OtBIfDc.coilseq.lupas_142015-04-17 22:04 2.7KCOILS output, window length 14
[ ]jp_OtBIfDc.coilseq.lupas_212015-04-17 22:04 2.7KCOILS output, window length 21
[ ]jp_OtBIfDc.coilseq.lupas_282015-04-17 22:04 2.7KCOILS output, window length 28
[ ]jp_OtBIfDc.concise2015-04-17 22:04 192KPrediction: coiled-coil, solvent, alignment
[ ]jp_OtBIfDc.concise.blc2015-04-17 22:04 101KBLC format prediction and alignment data
[ ]jp_OtBIfDc.concise.fasta2015-04-17 22:04 102KPrediction: coiled-coil, solvent, alignment
[ ]jp_OtBIfDc.concise.pdf2015-04-17 22:04 2.2KPDF prediction and alignment data
[ ]jp_OtBIfDc.concise.ps2015-04-17 22:04 1.3KPrediction: coiled-coil, solvent, alignment
[ ]jp_OtBIfDc.fasta2015-04-17 21:58 77 Input query sequence in FASTA format
[ ]jp_OtBIfDc.full_MSA.fasta2015-04-17 22:04 1.3MFull MSA before JPred filters in FASTA
[TXT]jp_OtBIfDc.full_MSA.fasta.noGaps.html2015-04-17 22:04 555KFull MSA before JPred filters in FASTA
[TXT]jp_OtBIfDc.full_MSA.fasta.withGaps.html2015-04-17 22:04 5.0MFull MSA before JPred filters in FASTA
[ ]jp_OtBIfDc.hmm2015-04-17 22:04 12KHHMer2 profile of the alignment
[TXT]jp_OtBIfDc.html2015-04-17 22:04 348KHTML prediction and alignment data
[ ]jp_OtBIfDc.input2015-04-17 19:25 71 Raw input data for analysis
[ ]jp_OtBIfDc.jalview2015-04-17 22:04 2.1KJalview annotation file for alignment
[ ]jp_OtBIfDc.jnet2015-04-17 22:04 2.4KJnet secondary structure output
[TXT]jp_OtBIfDc.profile2015-04-17 22:02 11KPSIBLAST profile from alignment
[ ]jp_OtBIfDc.pssm2015-04-17 22:04 14KPSIBLAST PSSM for Jnet
[TXT]jp_OtBIfDc.results.html2016-02-15 12:20 36KJPred results page
[TXT]jp_OtBIfDc.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_OtBIfDc.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_OtBIfDc.seq2015-04-17 19:25 77 Sequence data file
[TXT]jp_OtBIfDc.simple.html2015-04-17 22:04 1.1KBrief HTML: sequence and prediction only
[TXT]jp_OtBIfDc.svg.html2015-04-17 22:04 28KJalview SVG summary of results
[ ]jp_OtBIfDc.tar.gz2015-04-17 22:05 1.4MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.