JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:04 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2wfia_.name2015-04-17 18:47 0 Job name flag file
[ ]jp_8N7NFsd.align2015-04-17 21:03 140KPSIBLAST alignment in FASTA format
[TXT]jp_8N7NFsd.als2015-04-17 21:03 2.5KAlscript command file for PS/PDF output
[ ]jp_8N7NFsd.blast.gz2015-04-17 21:01 15MCompressed PSIBLAST output file
[TXT]jp_8N7NFsd.coils.csv2015-04-17 21:03 1.0KCOILS output in CSV format
[ ]jp_8N7NFsd.coilseq.lupas_142015-04-17 21:03 7.2KCOILS output, window length 14
[ ]jp_8N7NFsd.coilseq.lupas_212015-04-17 21:03 7.2KCOILS output, window length 21
[ ]jp_8N7NFsd.coilseq.lupas_282015-04-17 21:03 7.2KCOILS output, window length 28
[ ]jp_8N7NFsd.concise2015-04-17 21:03 277KPrediction: coiled-coil, solvent, alignment
[ ]jp_8N7NFsd.concise.blc2015-04-17 21:03 141KBLC format prediction and alignment data
[ ]jp_8N7NFsd.concise.fasta2015-04-17 21:03 142KPrediction: coiled-coil, solvent, alignment
[ ]jp_8N7NFsd.concise.pdf2015-04-17 21:03 903KPDF prediction and alignment data
[ ]jp_8N7NFsd.concise.ps2015-04-17 21:03 17MPrediction: coiled-coil, solvent, alignment
[ ]jp_8N7NFsd.fasta2015-04-17 20:51 187 Input query sequence in FASTA format
[ ]jp_8N7NFsd.full_MSA.fasta2015-04-17 21:02 27MFull MSA before JPred filters in FASTA
[TXT]jp_8N7NFsd.full_MSA.fasta.noGaps.html2015-04-17 21:04 2.7MFull MSA before JPred filters in FASTA
[TXT]jp_8N7NFsd.full_MSA.fasta.withGaps.html2015-04-17 21:04 64MFull MSA before JPred filters in FASTA
[ ]jp_8N7NFsd.hmm2015-04-17 21:03 32KHHMer2 profile of the alignment
[TXT]jp_8N7NFsd.html2015-04-17 21:03 297KHTML prediction and alignment data
[ ]jp_8N7NFsd.input2015-04-17 18:47 179 Raw input data for analysis
[ ]jp_8N7NFsd.jalview2015-04-17 21:03 4.2KJalview annotation file for alignment
[ ]jp_8N7NFsd.jnet2015-04-17 21:03 6.3KJnet secondary structure output
[TXT]jp_8N7NFsd.profile2015-04-17 21:00 28KPSIBLAST profile from alignment
[ ]jp_8N7NFsd.pssm2015-04-17 21:03 37KPSIBLAST PSSM for Jnet
[TXT]jp_8N7NFsd.results.html2016-02-15 12:20 76KJPred results page
[TXT]jp_8N7NFsd.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_8N7NFsd.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_8N7NFsd.seq2015-04-17 18:47 187 Sequence data file
[TXT]jp_8N7NFsd.simple.html2015-04-17 21:03 1.4KBrief HTML: sequence and prediction only
[TXT]jp_8N7NFsd.svg.html2015-04-17 21:04 68KJalview SVG summary of results
[ ]jp_8N7NFsd.tar.gz2015-04-17 21:04 22MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.