A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[ ]](/icons/unknown.gif){kind=icon} | jp_V7wYjSQ.input | 2015-04-17 16:59 | 89 | Raw input data for analysis |
| jp_V7wYjSQ.seq | 2015-04-17 16:59 | 96 | Sequence data file |
![[TXT]](/icons/text.gif){kind=icon} | d2wkxa1.name | 2015-04-17 16:59 | 0 | Job name flag file |
| jp_V7wYjSQ.fasta | 2015-04-17 17:59 | 96 | Input query sequence in FASTA format |
| jp_V7wYjSQ.profile | 2015-04-17 18:00 | 13K | PSIBLAST profile from alignment |
![[ ]](/icons/compressed.gif){kind=icon} | jp_V7wYjSQ.blast.gz | 2015-04-17 18:01 | 152K | Compressed PSIBLAST output file |
| jp_V7wYjSQ.full_MSA.fasta | 2015-04-17 18:01 | 192K | Full MSA before JPred filters in FASTA |
| jp_V7wYjSQ.align | 2015-04-17 18:01 | 47K | PSIBLAST alignment in FASTA format |
| jp_V7wYjSQ.pssm | 2015-04-17 18:01 | 18K | PSIBLAST PSSM for Jnet |
| jp_V7wYjSQ.hmm | 2015-04-17 18:01 | 15K | HHMer2 profile of the alignment |
| jp_V7wYjSQ.jnet | 2015-04-17 18:01 | 3.1K | Jnet secondary structure output |
| jp_V7wYjSQ.coilseq.lupas_21 | 2015-04-17 18:01 | 3.4K | COILS output, window length 21 |
| jp_V7wYjSQ.coilseq.lupas_14 | 2015-04-17 18:01 | 3.4K | COILS output, window length 14 |
| jp_V7wYjSQ.coilseq.lupas_28 | 2015-04-17 18:01 | 3.4K | COILS output, window length 28 |
| jp_V7wYjSQ.coils.csv | 2015-04-17 18:01 | 522 | COILS output in CSV format |
| jp_V7wYjSQ.concise | 2015-04-17 18:01 | 91K | Prediction: coiled-coil, solvent, alignment |
| jp_V7wYjSQ.html | 2015-04-17 18:01 | 146K | HTML prediction and alignment data |
| jp_V7wYjSQ.simple.html | 2015-04-17 18:01 | 1.1K | Brief HTML: sequence and prediction only |
| jp_V7wYjSQ.jalview | 2015-04-17 18:01 | 2.5K | Jalview annotation file for alignment |
| jp_V7wYjSQ.concise.fasta | 2015-04-17 18:01 | 48K | Prediction: coiled-coil, solvent, alignment |
| jp_V7wYjSQ.concise.blc | 2015-04-17 18:01 | 47K | BLC format prediction and alignment data |
| jp_V7wYjSQ.als | 2015-04-17 18:01 | 1.8K | Alscript command file for PS/PDF output |
| jp_V7wYjSQ.concise.ps | 2015-04-17 18:01 | 5.0M | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_V7wYjSQ.concise.pdf | 2015-04-17 18:01 | 274K | PDF prediction and alignment data |
| jp_V7wYjSQ.full_MSA.fasta.withGaps.html | 2015-04-17 18:01 | 1.0M | Full MSA before JPred filters in FASTA |
| jp_V7wYjSQ.full_MSA.fasta.noGaps.html | 2015-04-17 18:01 | 156K | Full MSA before JPred filters in FASTA |
![[TXT]](jp_V7wYjSQ.svg.html) | jp_V7wYjSQ.svg.html | 2015-04-17 18:01 | 34K | Jalview SVG summary of results |
| LOG | 2015-04-17 18:01 | 4.7K | JPred server log file |
| jp_V7wYjSQ.tar.gz | 2015-04-17 18:01 | 614K | Archive containing complete results |
| README | 2016-02-15 12:20 | 2.1K | Results file descriptions |
| jp_V7wYjSQ.results.html | 2016-02-15 12:20 | 43K | JPred results page |
| jp_V7wYjSQ.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_V7wYjSQ.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
