A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 20:02 | 4.7K | JPred server log file |
| README | 2016-02-15 12:20 | 2.1K | Results file descriptions |
| d2x42a3.name | 2015-04-17 18:11 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_fCRg4VA.align | 2015-04-17 20:01 | 145K | PSIBLAST alignment in FASTA format |
| jp_fCRg4VA.als | 2015-04-17 20:01 | 3.1K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_fCRg4VA.blast.gz | 2015-04-17 20:00 | 6.7M | Compressed PSIBLAST output file |
| jp_fCRg4VA.coils.csv | 2015-04-17 20:01 | 762 | COILS output in CSV format |
| jp_fCRg4VA.coilseq.lupas_14 | 2015-04-17 20:01 | 5.1K | COILS output, window length 14 |
| jp_fCRg4VA.coilseq.lupas_21 | 2015-04-17 20:01 | 5.1K | COILS output, window length 21 |
| jp_fCRg4VA.coilseq.lupas_28 | 2015-04-17 20:01 | 5.1K | COILS output, window length 28 |
| jp_fCRg4VA.concise | 2015-04-17 20:01 | 282K | Prediction: coiled-coil, solvent, alignment |
| jp_fCRg4VA.concise.blc | 2015-04-17 20:01 | 145K | BLC format prediction and alignment data |
| jp_fCRg4VA.concise.fasta | 2015-04-17 20:01 | 147K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_fCRg4VA.concise.pdf | 2015-04-17 20:01 | 968K | PDF prediction and alignment data |
| jp_fCRg4VA.concise.ps | 2015-04-17 20:01 | 17M | Prediction: coiled-coil, solvent, alignment |
| jp_fCRg4VA.fasta | 2015-04-17 19:54 | 136 | Input query sequence in FASTA format |
| jp_fCRg4VA.full_MSA.fasta | 2015-04-17 20:00 | 10M | Full MSA before JPred filters in FASTA |
| jp_fCRg4VA.full_MSA.fasta.noGaps.html | 2015-04-17 20:01 | 1.6M | Full MSA before JPred filters in FASTA |
| jp_fCRg4VA.full_MSA.fasta.withGaps.html | 2015-04-17 20:01 | 29M | Full MSA before JPred filters in FASTA |
| jp_fCRg4VA.hmm | 2015-04-17 20:01 | 23K | HHMer2 profile of the alignment |
| jp_fCRg4VA.html | 2015-04-17 20:01 | 358K | HTML prediction and alignment data |
| jp_fCRg4VA.input | 2015-04-17 18:11 | 129 | Raw input data for analysis |
| jp_fCRg4VA.jalview | 2015-04-17 20:01 | 3.3K | Jalview annotation file for alignment |
| jp_fCRg4VA.jnet | 2015-04-17 20:01 | 4.5K | Jnet secondary structure output |
| jp_fCRg4VA.profile | 2015-04-17 19:58 | 20K | PSIBLAST profile from alignment |
| jp_fCRg4VA.pssm | 2015-04-17 20:01 | 26K | PSIBLAST PSSM for Jnet |
| jp_fCRg4VA.results.html | 2016-02-15 12:20 | 60K | JPred results page |
| jp_fCRg4VA.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_fCRg4VA.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_fCRg4VA.seq | 2015-04-17 18:11 | 136 | Sequence data file |
| jp_fCRg4VA.simple.html | 2015-04-17 20:01 | 1.5K | Brief HTML: sequence and prediction only |
![[TXT]](jp_fCRg4VA.svg.html) | jp_fCRg4VA.svg.html | 2015-04-17 20:02 | 51K | Jalview SVG summary of results |
| jp_fCRg4VA.tar.gz | 2015-04-17 20:02 | 11M | Archive containing complete results |
