JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]jp_eBSx_fq.als2015-04-17 20:14 3.4KAlscript command file for PS/PDF output
[ ]jp_eBSx_fq.tar.gz2015-04-17 20:15 27MArchive containing complete results
[ ]jp_eBSx_fq.concise.blc2015-04-17 20:14 208KBLC format prediction and alignment data
[TXT]jp_eBSx_fq.simple.html2015-04-17 20:14 1.6KBrief HTML: sequence and prediction only
[TXT]jp_eBSx_fq.coils.csv2015-04-17 20:14 1.2KCOILS output in CSV format
[ ]jp_eBSx_fq.coilseq.lupas_142015-04-17 20:14 8.6KCOILS output, window length 14
[ ]jp_eBSx_fq.coilseq.lupas_212015-04-17 20:14 8.6KCOILS output, window length 21
[ ]jp_eBSx_fq.coilseq.lupas_282015-04-17 20:14 8.6KCOILS output, window length 28
[ ]jp_eBSx_fq.blast.gz2015-04-17 20:12 17MCompressed PSIBLAST output file
[ ]jp_eBSx_fq.full_MSA.fasta2015-04-17 20:13 37MFull MSA before JPred filters in FASTA
[TXT]jp_eBSx_fq.full_MSA.fasta.noGaps.html2015-04-17 20:15 3.3MFull MSA before JPred filters in FASTA
[TXT]jp_eBSx_fq.full_MSA.fasta.withGaps.html2015-04-17 20:15 85MFull MSA before JPred filters in FASTA
[ ]jp_eBSx_fq.hmm2015-04-17 20:14 38KHHMer2 profile of the alignment
[TXT]jp_eBSx_fq.html2015-04-17 20:14 407KHTML prediction and alignment data
[TXT]jp_eBSx_fq.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_eBSx_fq.fasta2015-04-17 19:54 219 Input query sequence in FASTA format
[TXT]jp_eBSx_fq.results.html2016-02-15 12:20 92KJPred results page
[TXT]LOG2015-04-17 20:15 4.9KJPred server log file
[TXT]jp_eBSx_fq.svg.html2015-04-17 20:15 84KJalview SVG summary of results
[ ]jp_eBSx_fq.jalview2015-04-17 20:14 4.9KJalview annotation file for alignment
[TXT]jp_eBSx_fq.results_jalview.html2016-02-24 17:18 13KJalview results options
[ ]jp_eBSx_fq.jnet2015-04-17 20:14 7.5KJnet secondary structure output
[TXT]d2x5oa2.name2015-04-17 18:11 0 Job name flag file
[ ]jp_eBSx_fq.concise.pdf2015-04-17 20:14 2.2KPDF prediction and alignment data
[ ]jp_eBSx_fq.pssm2015-04-17 20:14 44KPSIBLAST PSSM for Jnet
[ ]jp_eBSx_fq.align2015-04-17 20:14 207KPSIBLAST alignment in FASTA format
[TXT]jp_eBSx_fq.profile2015-04-17 20:08 33KPSIBLAST profile from alignment
[ ]jp_eBSx_fq.concise2015-04-17 20:14 409KPrediction: coiled-coil, solvent, alignment
[ ]jp_eBSx_fq.concise.fasta2015-04-17 20:14 209KPrediction: coiled-coil, solvent, alignment
[ ]jp_eBSx_fq.concise.ps2015-04-17 20:14 1.3KPrediction: coiled-coil, solvent, alignment
[ ]jp_eBSx_fq.input2015-04-17 18:11 211 Raw input data for analysis
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[ ]jp_eBSx_fq.seq2015-04-17 18:11 219 Sequence data file
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.