JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:59 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2x5oa3.name2015-04-17 18:48 0 Job name flag file
[ ]jp_T6G4pK9.align2015-04-17 20:58 157KPSIBLAST alignment in FASTA format
[TXT]jp_T6G4pK9.als2015-04-17 20:58 2.9KAlscript command file for PS/PDF output
[ ]jp_T6G4pK9.blast.gz2015-04-17 20:58 3.3MCompressed PSIBLAST output file
[TXT]jp_T6G4pK9.coils.csv2015-04-17 20:58 882 COILS output in CSV format
[ ]jp_T6G4pK9.coilseq.lupas_142015-04-17 20:58 6.0KCOILS output, window length 14
[ ]jp_T6G4pK9.coilseq.lupas_212015-04-17 20:58 6.0KCOILS output, window length 21
[ ]jp_T6G4pK9.coilseq.lupas_282015-04-17 20:58 6.0KCOILS output, window length 28
[ ]jp_T6G4pK9.concise2015-04-17 20:58 307KPrediction: coiled-coil, solvent, alignment
[ ]jp_T6G4pK9.concise.blc2015-04-17 20:58 157KBLC format prediction and alignment data
[ ]jp_T6G4pK9.concise.fasta2015-04-17 20:58 159KPrediction: coiled-coil, solvent, alignment
[ ]jp_T6G4pK9.concise.pdf2015-04-17 20:59 1.0MPDF prediction and alignment data
[ ]jp_T6G4pK9.concise.ps2015-04-17 20:58 19MPrediction: coiled-coil, solvent, alignment
[ ]jp_T6G4pK9.fasta2015-04-17 20:52 156 Input query sequence in FASTA format
[ ]jp_T6G4pK9.full_MSA.fasta2015-04-17 20:58 5.6MFull MSA before JPred filters in FASTA
[TXT]jp_T6G4pK9.full_MSA.fasta.noGaps.html2015-04-17 20:59 1.0MFull MSA before JPred filters in FASTA
[TXT]jp_T6G4pK9.full_MSA.fasta.withGaps.html2015-04-17 20:59 15MFull MSA before JPred filters in FASTA
[ ]jp_T6G4pK9.hmm2015-04-17 20:58 27KHHMer2 profile of the alignment
[TXT]jp_T6G4pK9.html2015-04-17 20:58 362KHTML prediction and alignment data
[ ]jp_T6G4pK9.input2015-04-17 18:48 149 Raw input data for analysis
[ ]jp_T6G4pK9.jalview2015-04-17 20:58 3.7KJalview annotation file for alignment
[ ]jp_T6G4pK9.jnet2015-04-17 20:58 5.2KJnet secondary structure output
[TXT]jp_T6G4pK9.profile2015-04-17 20:55 23KPSIBLAST profile from alignment
[ ]jp_T6G4pK9.pssm2015-04-17 20:58 31KPSIBLAST PSSM for Jnet
[TXT]jp_T6G4pK9.results.html2016-02-15 12:20 67KJPred results page
[TXT]jp_T6G4pK9.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_T6G4pK9.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_T6G4pK9.seq2015-04-17 18:48 156 Sequence data file
[TXT]jp_T6G4pK9.simple.html2015-04-17 20:58 1.4KBrief HTML: sequence and prediction only
[TXT]jp_T6G4pK9.svg.html2015-04-17 20:59 59KJalview SVG summary of results
[ ]jp_T6G4pK9.tar.gz2015-04-17 20:59 6.2MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.