JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:58 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2xola_.name2015-04-17 16:24 0 Job name flag file
[ ]jp_a2XHApN.align2015-04-17 16:58 137KPSIBLAST alignment in FASTA format
[TXT]jp_a2XHApN.als2015-04-17 16:58 2.1KAlscript command file for PS/PDF output
[ ]jp_a2XHApN.blast.gz2015-04-17 16:57 336KCompressed PSIBLAST output file
[TXT]jp_a2XHApN.coils.csv2015-04-17 16:58 1.0KCOILS output in CSV format
[ ]jp_a2XHApN.coilseq.lupas_142015-04-17 16:58 7.1KCOILS output, window length 14
[ ]jp_a2XHApN.coilseq.lupas_212015-04-17 16:58 7.1KCOILS output, window length 21
[ ]jp_a2XHApN.coilseq.lupas_282015-04-17 16:58 7.1KCOILS output, window length 28
[ ]jp_a2XHApN.concise2015-04-17 16:58 270KPrediction: coiled-coil, solvent, alignment
[ ]jp_a2XHApN.concise.blc2015-04-17 16:58 138KBLC format prediction and alignment data
[ ]jp_a2XHApN.concise.fasta2015-04-17 16:58 139KPrediction: coiled-coil, solvent, alignment
[ ]jp_a2XHApN.concise.pdf2015-04-17 16:58 880KPDF prediction and alignment data
[ ]jp_a2XHApN.concise.ps2015-04-17 16:58 16MPrediction: coiled-coil, solvent, alignment
[ ]jp_a2XHApN.fasta2015-04-17 16:54 183 Input query sequence in FASTA format
[ ]jp_a2XHApN.full_MSA.fasta2015-04-17 16:57 1.4MFull MSA before JPred filters in FASTA
[TXT]jp_a2XHApN.full_MSA.fasta.noGaps.html2015-04-17 16:58 272KFull MSA before JPred filters in FASTA
[TXT]jp_a2XHApN.full_MSA.fasta.withGaps.html2015-04-17 16:58 4.1MFull MSA before JPred filters in FASTA
[ ]jp_a2XHApN.hmm2015-04-17 16:58 32KHHMer2 profile of the alignment
[TXT]jp_a2XHApN.html2015-04-17 16:58 299KHTML prediction and alignment data
[ ]jp_a2XHApN.input2015-04-17 16:24 175 Raw input data for analysis
[ ]jp_a2XHApN.jalview2015-04-17 16:58 4.3KJalview annotation file for alignment
[ ]jp_a2XHApN.jnet2015-04-17 16:58 6.2KJnet secondary structure output
[TXT]jp_a2XHApN.profile2015-04-17 16:55 27KPSIBLAST profile from alignment
[ ]jp_a2XHApN.pssm2015-04-17 16:58 36KPSIBLAST PSSM for Jnet
[TXT]jp_a2XHApN.results.html2016-02-15 12:20 75KJPred results page
[TXT]jp_a2XHApN.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_a2XHApN.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_a2XHApN.seq2015-04-17 16:24 183 Sequence data file
[TXT]jp_a2XHApN.simple.html2015-04-17 16:58 1.3KBrief HTML: sequence and prediction only
[TXT]jp_a2XHApN.svg.html2015-04-17 16:58 66KJalview SVG summary of results
[ ]jp_a2XHApN.tar.gz2015-04-17 16:58 1.8MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.