JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:15 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2xova_.name2015-04-17 15:46 0 Job name flag file
[ ]jp_hbC0OEI.align2015-04-17 16:13 116KPSIBLAST alignment in FASTA format
[TXT]jp_hbC0OEI.als2015-04-17 16:13 2.6KAlscript command file for PS/PDF output
[ ]jp_hbC0OEI.blast.gz2015-04-17 16:09 5.4MCompressed PSIBLAST output file
[TXT]jp_hbC0OEI.coils.csv2015-04-17 16:13 1.1KCOILS output in CSV format
[ ]jp_hbC0OEI.coilseq.lupas_142015-04-17 16:13 7.6KCOILS output, window length 14
[ ]jp_hbC0OEI.coilseq.lupas_212015-04-17 16:13 7.6KCOILS output, window length 21
[ ]jp_hbC0OEI.coilseq.lupas_282015-04-17 16:13 7.6KCOILS output, window length 28
[ ]jp_hbC0OEI.concise2015-04-17 16:13 230KPrediction: coiled-coil, solvent, alignment
[ ]jp_hbC0OEI.concise.blc2015-04-17 16:13 117KBLC format prediction and alignment data
[ ]jp_hbC0OEI.concise.fasta2015-04-17 16:13 117KPrediction: coiled-coil, solvent, alignment
[ ]jp_hbC0OEI.concise.pdf2015-04-17 16:14 829KPDF prediction and alignment data
[ ]jp_hbC0OEI.concise.ps2015-04-17 16:14 14MPrediction: coiled-coil, solvent, alignment
[ ]jp_hbC0OEI.fasta2015-04-17 15:59 196 Input query sequence in FASTA format
[ ]jp_hbC0OEI.full_MSA.fasta2015-04-17 16:13 20MFull MSA before JPred filters in FASTA
[TXT]jp_hbC0OEI.full_MSA.fasta.noGaps.html2015-04-17 16:14 1.9MFull MSA before JPred filters in FASTA
[TXT]jp_hbC0OEI.full_MSA.fasta.withGaps.html2015-04-17 16:14 43MFull MSA before JPred filters in FASTA
[ ]jp_hbC0OEI.hmm2015-04-17 16:13 34KHHMer2 profile of the alignment
[TXT]jp_hbC0OEI.html2015-04-17 16:13 249KHTML prediction and alignment data
[ ]jp_hbC0OEI.input2015-04-17 15:46 188 Raw input data for analysis
[ ]jp_hbC0OEI.jalview2015-04-17 16:13 4.6KJalview annotation file for alignment
[ ]jp_hbC0OEI.jnet2015-04-17 16:13 6.7KJnet secondary structure output
[TXT]jp_hbC0OEI.profile2015-04-17 16:06 29KPSIBLAST profile from alignment
[ ]jp_hbC0OEI.pssm2015-04-17 16:13 39KPSIBLAST PSSM for Jnet
[TXT]jp_hbC0OEI.results.html2016-02-15 12:20 81KJPred results page
[TXT]jp_hbC0OEI.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_hbC0OEI.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_hbC0OEI.seq2015-04-17 15:46 196 Sequence data file
[TXT]jp_hbC0OEI.simple.html2015-04-17 16:13 1.4KBrief HTML: sequence and prediction only
[TXT]jp_hbC0OEI.svg.html2015-04-17 16:15 73KJalview SVG summary of results
[ ]jp_hbC0OEI.tar.gz2015-04-17 16:15 10MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.