A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 21:02 | 4.7K | JPred server log file |
| README | 2016-02-15 12:20 | 2.1K | Results file descriptions |
| d2y71a_.name | 2015-04-17 18:48 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_JSSbGrv.align | 2015-04-17 21:01 | 146K | PSIBLAST alignment in FASTA format |
| jp_JSSbGrv.als | 2015-04-17 21:01 | 2.7K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_JSSbGrv.blast.gz | 2015-04-17 21:00 | 1.1M | Compressed PSIBLAST output file |
| jp_JSSbGrv.coils.csv | 2015-04-17 21:01 | 858 | COILS output in CSV format |
| jp_JSSbGrv.coilseq.lupas_14 | 2015-04-17 21:01 | 5.8K | COILS output, window length 14 |
| jp_JSSbGrv.coilseq.lupas_21 | 2015-04-17 21:01 | 5.8K | COILS output, window length 21 |
| jp_JSSbGrv.coilseq.lupas_28 | 2015-04-17 21:01 | 5.8K | COILS output, window length 28 |
| jp_JSSbGrv.concise | 2015-04-17 21:01 | 285K | Prediction: coiled-coil, solvent, alignment |
| jp_JSSbGrv.concise.blc | 2015-04-17 21:01 | 146K | BLC format prediction and alignment data |
| jp_JSSbGrv.concise.fasta | 2015-04-17 21:01 | 147K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_JSSbGrv.concise.pdf | 2015-04-17 21:01 | 1.0M | PDF prediction and alignment data |
| jp_JSSbGrv.concise.ps | 2015-04-17 21:01 | 17M | Prediction: coiled-coil, solvent, alignment |
| jp_JSSbGrv.fasta | 2015-04-17 20:53 | 152 | Input query sequence in FASTA format |
| jp_JSSbGrv.full_MSA.fasta | 2015-04-17 21:00 | 1.5M | Full MSA before JPred filters in FASTA |
| jp_JSSbGrv.full_MSA.fasta.noGaps.html | 2015-04-17 21:01 | 776K | Full MSA before JPred filters in FASTA |
| jp_JSSbGrv.full_MSA.fasta.withGaps.html | 2015-04-17 21:01 | 6.9M | Full MSA before JPred filters in FASTA |
| jp_JSSbGrv.hmm | 2015-04-17 21:01 | 26K | HHMer2 profile of the alignment |
| jp_JSSbGrv.html | 2015-04-17 21:01 | 342K | HTML prediction and alignment data |
| jp_JSSbGrv.input | 2015-04-17 18:48 | 145 | Raw input data for analysis |
| jp_JSSbGrv.jalview | 2015-04-17 21:01 | 3.6K | Jalview annotation file for alignment |
| jp_JSSbGrv.jnet | 2015-04-17 21:01 | 5.1K | Jnet secondary structure output |
| jp_JSSbGrv.profile | 2015-04-17 20:58 | 22K | PSIBLAST profile from alignment |
| jp_JSSbGrv.pssm | 2015-04-17 21:01 | 30K | PSIBLAST PSSM for Jnet |
| jp_JSSbGrv.results.html | 2016-02-15 12:20 | 65K | JPred results page |
| jp_JSSbGrv.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_JSSbGrv.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_JSSbGrv.seq | 2015-04-17 18:48 | 152 | Sequence data file |
| jp_JSSbGrv.simple.html | 2015-04-17 21:01 | 1.4K | Brief HTML: sequence and prediction only |
![[TXT]](jp_JSSbGrv.svg.html) | jp_JSSbGrv.svg.html | 2015-04-17 21:01 | 57K | Jalview SVG summary of results |
| jp_JSSbGrv.tar.gz | 2015-04-17 21:02 | 3.1M | Archive containing complete results |
