JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 22:05 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2y8ya1.name2015-04-17 19:25 0 Job name flag file
[ ]jp_YpXGVWl.align2015-04-17 22:04 118KPSIBLAST alignment in FASTA format
[TXT]jp_YpXGVWl.als2015-04-17 22:04 3.6KAlscript command file for PS/PDF output
[ ]jp_YpXGVWl.blast.gz2015-04-17 22:04 817KCompressed PSIBLAST output file
[TXT]jp_YpXGVWl.coils.csv2015-04-17 22:04 1.2KCOILS output in CSV format
[ ]jp_YpXGVWl.coilseq.lupas_142015-04-17 22:04 8.4KCOILS output, window length 14
[ ]jp_YpXGVWl.coilseq.lupas_212015-04-17 22:04 8.4KCOILS output, window length 21
[ ]jp_YpXGVWl.coilseq.lupas_282015-04-17 22:04 8.4KCOILS output, window length 28
[ ]jp_YpXGVWl.concise2015-04-17 22:04 236KPrediction: coiled-coil, solvent, alignment
[ ]jp_YpXGVWl.concise.blc2015-04-17 22:04 119KBLC format prediction and alignment data
[ ]jp_YpXGVWl.concise.fasta2015-04-17 22:04 120KPrediction: coiled-coil, solvent, alignment
[ ]jp_YpXGVWl.concise.pdf2015-04-17 22:05 841KPDF prediction and alignment data
[ ]jp_YpXGVWl.concise.ps2015-04-17 22:04 15MPrediction: coiled-coil, solvent, alignment
[ ]jp_YpXGVWl.fasta2015-04-17 21:58 216 Input query sequence in FASTA format
[ ]jp_YpXGVWl.full_MSA.fasta2015-04-17 22:04 1.4MFull MSA before JPred filters in FASTA
[TXT]jp_YpXGVWl.full_MSA.fasta.noGaps.html2015-04-17 22:05 208KFull MSA before JPred filters in FASTA
[TXT]jp_YpXGVWl.full_MSA.fasta.withGaps.html2015-04-17 22:05 3.7MFull MSA before JPred filters in FASTA
[ ]jp_YpXGVWl.hmm2015-04-17 22:04 38KHHMer2 profile of the alignment
[TXT]jp_YpXGVWl.html2015-04-17 22:04 241KHTML prediction and alignment data
[ ]jp_YpXGVWl.input2015-04-17 19:25 208 Raw input data for analysis
[ ]jp_YpXGVWl.jalview2015-04-17 22:04 4.8KJalview annotation file for alignment
[ ]jp_YpXGVWl.jnet2015-04-17 22:04 7.4KJnet secondary structure output
[TXT]jp_YpXGVWl.profile2015-04-17 22:03 32KPSIBLAST profile from alignment
[ ]jp_YpXGVWl.pssm2015-04-17 22:04 43KPSIBLAST PSSM for Jnet
[TXT]jp_YpXGVWl.results.html2016-02-15 12:20 89KJPred results page
[TXT]jp_YpXGVWl.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_YpXGVWl.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_YpXGVWl.seq2015-04-17 19:25 216 Sequence data file
[TXT]jp_YpXGVWl.simple.html2015-04-17 22:04 1.6KBrief HTML: sequence and prediction only
[TXT]jp_YpXGVWl.svg.html2015-04-17 22:05 81KJalview SVG summary of results
[ ]jp_YpXGVWl.tar.gz2015-04-17 22:05 2.2MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.