JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:18 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2yima_.name2015-04-17 17:36 0 Job name flag file
[ ]jp_q6WTvo3.align2015-04-17 19:16 304KPSIBLAST alignment in FASTA format
[TXT]jp_q6WTvo3.als2015-04-17 19:16 4.9KAlscript command file for PS/PDF output
[ ]jp_q6WTvo3.blast.gz2015-04-17 19:11 29MCompressed PSIBLAST output file
[TXT]jp_q6WTvo3.coils.csv2015-04-17 19:16 2.1KCOILS output in CSV format
[ ]jp_q6WTvo3.coilseq.lupas_142015-04-17 19:16 15KCOILS output, window length 14
[ ]jp_q6WTvo3.coilseq.lupas_212015-04-17 19:16 15KCOILS output, window length 21
[ ]jp_q6WTvo3.coilseq.lupas_282015-04-17 19:16 15KCOILS output, window length 28
[ ]jp_q6WTvo3.concise2015-04-17 19:16 606KPrediction: coiled-coil, solvent, alignment
[ ]jp_q6WTvo3.concise.blc2015-04-17 19:16 305KBLC format prediction and alignment data
[ ]jp_q6WTvo3.concise.fasta2015-04-17 19:16 307KPrediction: coiled-coil, solvent, alignment
[ ]jp_q6WTvo3.concise.pdf2015-04-17 19:16 2.2MPDF prediction and alignment data
[ ]jp_q6WTvo3.concise.ps2015-04-17 19:16 39MPrediction: coiled-coil, solvent, alignment
[ ]jp_q6WTvo3.fasta2015-04-17 18:55 372 Input query sequence in FASTA format
[ ]jp_q6WTvo3.full_MSA.fasta2015-04-17 19:14 55MFull MSA before JPred filters in FASTA
[TXT]jp_q6WTvo3.full_MSA.fasta.noGaps.html2015-04-17 19:18 4.7MFull MSA before JPred filters in FASTA
[TXT]jp_q6WTvo3.full_MSA.fasta.withGaps.html2015-04-17 19:18 136MFull MSA before JPred filters in FASTA
[ ]jp_q6WTvo3.hmm2015-04-17 19:16 67KHHMer2 profile of the alignment
[TXT]jp_q6WTvo3.html2015-04-17 19:16 492KHTML prediction and alignment data
[ ]jp_q6WTvo3.input2015-04-17 17:36 362 Raw input data for analysis
[ ]jp_q6WTvo3.jalview2015-04-17 19:16 7.9KJalview annotation file for alignment
[ ]jp_q6WTvo3.jnet2015-04-17 19:16 13KJnet secondary structure output
[TXT]jp_q6WTvo3.profile2015-04-17 19:10 57KPSIBLAST profile from alignment
[ ]jp_q6WTvo3.pssm2015-04-17 19:16 76KPSIBLAST PSSM for Jnet
[TXT]jp_q6WTvo3.results.html2016-02-15 12:20 151KJPred results page
[TXT]jp_q6WTvo3.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_q6WTvo3.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_q6WTvo3.seq2015-04-17 17:36 372 Sequence data file
[TXT]jp_q6WTvo3.simple.html2015-04-17 19:16 2.2KBrief HTML: sequence and prediction only
[TXT]jp_q6WTvo3.svg.html2015-04-17 19:18 143KJalview SVG summary of results
[ ]jp_q6WTvo3.tar.gz2015-04-17 19:18 46MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.