JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[ ]jp_eQo5B3o.input2015-04-17 19:26 57 Raw input data for analysis
[ ]jp_eQo5B3o.seq2015-04-17 19:26 63 Sequence data file
[TXT]d2z7fi_.name2015-04-17 19:26 0 Job name flag file
[ ]jp_eQo5B3o.fasta2015-04-17 21:59 63 Input query sequence in FASTA format
[TXT]jp_eQo5B3o.profile2015-04-17 22:03 8.4KPSIBLAST profile from alignment
[ ]jp_eQo5B3o.blast.gz2015-04-17 22:05 80KCompressed PSIBLAST output file
[ ]jp_eQo5B3o.full_MSA.fasta2015-04-17 22:05 174KFull MSA before JPred filters in FASTA
[ ]jp_eQo5B3o.align2015-04-17 22:05 34KPSIBLAST alignment in FASTA format
[ ]jp_eQo5B3o.pssm2015-04-17 22:05 11KPSIBLAST PSSM for Jnet
[ ]jp_eQo5B3o.hmm2015-04-17 22:05 9.4KHHMer2 profile of the alignment
[ ]jp_eQo5B3o.jnet2015-04-17 22:05 1.9KJnet secondary structure output
[ ]jp_eQo5B3o.coilseq.lupas_212015-04-17 22:05 2.1KCOILS output, window length 21
[ ]jp_eQo5B3o.coilseq.lupas_142015-04-17 22:05 2.1KCOILS output, window length 14
[ ]jp_eQo5B3o.coilseq.lupas_282015-04-17 22:05 2.1KCOILS output, window length 28
[TXT]jp_eQo5B3o.coils.csv2015-04-17 22:05 330 COILS output in CSV format
[ ]jp_eQo5B3o.concise2015-04-17 22:05 63KPrediction: coiled-coil, solvent, alignment
[TXT]jp_eQo5B3o.html2015-04-17 22:05 129KHTML prediction and alignment data
[TXT]jp_eQo5B3o.simple.html2015-04-17 22:05 1.0KBrief HTML: sequence and prediction only
[ ]jp_eQo5B3o.jalview2015-04-17 22:05 1.7KJalview annotation file for alignment
[ ]jp_eQo5B3o.concise.fasta2015-04-17 22:05 34KPrediction: coiled-coil, solvent, alignment
[ ]jp_eQo5B3o.concise.blc2015-04-17 22:05 34KBLC format prediction and alignment data
[TXT]jp_eQo5B3o.als2015-04-17 22:05 1.3KAlscript command file for PS/PDF output
[ ]jp_eQo5B3o.concise.ps2015-04-17 22:05 3.1MPrediction: coiled-coil, solvent, alignment
[ ]jp_eQo5B3o.concise.pdf2015-04-17 22:05 169KPDF prediction and alignment data
[TXT]jp_eQo5B3o.full_MSA.fasta.withGaps.html2015-04-17 22:05 900KFull MSA before JPred filters in FASTA
[TXT]jp_eQo5B3o.full_MSA.fasta.noGaps.html2015-04-17 22:05 163KFull MSA before JPred filters in FASTA
[TXT]jp_eQo5B3o.svg.html2015-04-17 22:05 21KJalview SVG summary of results
[TXT]LOG2015-04-17 22:05 4.7KJPred server log file
[ ]jp_eQo5B3o.tar.gz2015-04-17 22:05 407KArchive containing complete results
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]jp_eQo5B3o.results.html2016-02-15 12:20 29KJPred results page
[TXT]jp_eQo5B3o.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_eQo5B3o.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.