A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 20:44 | 4.7K | JPred server log file |
| README | 2016-02-15 12:20 | 2.1K | Results file descriptions |
| d2zhja_.name | 2015-04-17 18:38 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_dZJLDEZ.align | 2015-04-17 20:43 | 182K | PSIBLAST alignment in FASTA format |
| jp_dZJLDEZ.als | 2015-04-17 20:43 | 4.8K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_dZJLDEZ.blast.gz | 2015-04-17 20:41 | 9.6M | Compressed PSIBLAST output file |
| jp_dZJLDEZ.coils.csv | 2015-04-17 20:43 | 1.9K | COILS output in CSV format |
| jp_dZJLDEZ.coilseq.lupas_14 | 2015-04-17 20:43 | 13K | COILS output, window length 14 |
| jp_dZJLDEZ.coilseq.lupas_21 | 2015-04-17 20:43 | 13K | COILS output, window length 21 |
| jp_dZJLDEZ.coilseq.lupas_28 | 2015-04-17 20:43 | 13K | COILS output, window length 28 |
| jp_dZJLDEZ.concise | 2015-04-17 20:43 | 367K | Prediction: coiled-coil, solvent, alignment |
| jp_dZJLDEZ.concise.blc | 2015-04-17 20:43 | 184K | BLC format prediction and alignment data |
| jp_dZJLDEZ.concise.fasta | 2015-04-17 20:43 | 185K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_dZJLDEZ.concise.pdf | 2015-04-17 20:43 | 1.2M | PDF prediction and alignment data |
| jp_dZJLDEZ.concise.ps | 2015-04-17 20:43 | 23M | Prediction: coiled-coil, solvent, alignment |
| jp_dZJLDEZ.fasta | 2015-04-17 20:36 | 332 | Input query sequence in FASTA format |
| jp_dZJLDEZ.full_MSA.fasta | 2015-04-17 20:42 | 22M | Full MSA before JPred filters in FASTA |
| jp_dZJLDEZ.full_MSA.fasta.noGaps.html | 2015-04-17 20:43 | 1.9M | Full MSA before JPred filters in FASTA |
| jp_dZJLDEZ.full_MSA.fasta.withGaps.html | 2015-04-17 20:43 | 53M | Full MSA before JPred filters in FASTA |
| jp_dZJLDEZ.hmm | 2015-04-17 20:43 | 59K | HHMer2 profile of the alignment |
| jp_dZJLDEZ.html | 2015-04-17 20:43 | 320K | HTML prediction and alignment data |
| jp_dZJLDEZ.input | 2015-04-17 18:38 | 322 | Raw input data for analysis |
| jp_dZJLDEZ.jalview | 2015-04-17 20:43 | 7.3K | Jalview annotation file for alignment |
| jp_dZJLDEZ.jnet | 2015-04-17 20:43 | 11K | Jnet secondary structure output |
| jp_dZJLDEZ.profile | 2015-04-17 20:39 | 50K | PSIBLAST profile from alignment |
| jp_dZJLDEZ.pssm | 2015-04-17 20:43 | 68K | PSIBLAST PSSM for Jnet |
| jp_dZJLDEZ.results.html | 2016-02-15 12:20 | 139K | JPred results page |
| jp_dZJLDEZ.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_dZJLDEZ.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_dZJLDEZ.seq | 2015-04-17 18:38 | 332 | Sequence data file |
| jp_dZJLDEZ.simple.html | 2015-04-17 20:43 | 2.1K | Brief HTML: sequence and prediction only |
![[TXT]](jp_dZJLDEZ.svg.html) | jp_dZJLDEZ.svg.html | 2015-04-17 20:43 | 131K | Jalview SVG summary of results |
| jp_dZJLDEZ.tar.gz | 2015-04-17 20:44 | 16M | Archive containing complete results |
